Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31792
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z70208-7|CAA94139.1|  287|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL110487-1|CAB54424.1|  610|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z81461-4|CAB62798.1|  256|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical
           protein Y69H2.14 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = -3

Query: 166 DNCKPQSPARRSFSGLPGPLGQ----GE--HADSFSVA 71
           ++C+  +PAR+   G PGP GQ    GE  H+D+ S A
Sbjct: 190 NDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTA 227


>Z70208-7|CAA94139.1|  287|Caenorhabditis elegans Hypothetical
           protein F54B11.7 protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 324 PTTPTAVKPPRVGPKTSLNHS-IGSSD 247
           PTTP A KP    PKTSL+ S  GS+D
Sbjct: 69  PTTPPA-KPKEPAPKTSLSKSDSGSAD 94


>AL110487-1|CAB54424.1|  610|Caenorhabditis elegans Hypothetical
           protein Y39E4B.1 protein.
          Length = 610

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 192 LLGIPRLWGIIANPNPQHEGVSAGCPGL*ARENM 91
           L G+P ++G++  P+   EG++    G    ENM
Sbjct: 300 LYGVPGVYGVVTLPSGVREGINMFLEGFIRTENM 333


>Z81461-4|CAB62798.1|  256|Caenorhabditis elegans Hypothetical
           protein C04F12.6 protein.
          Length = 256

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 24/91 (26%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
 Frame = +2

Query: 110 RPGQPAETPSCWGLGFAIIPHKRGIPSKRES*ARVDYVPALCTHRPSLLPIE*F-SEVFG 286
           + G  A TPS  G      P +   P+     A     P   TH P+   +    + VFG
Sbjct: 55  KEGSEARTPSAAGSAAPTAPAEGAAPAAGAPAAVAPKPPMAATHDPNYQTLAGLDNNVFG 114

Query: 287 PTRGGFTAVGVVGKXTKLDHLEEVKVVTRFP 379
              G   A G  G     D  +  K  T  P
Sbjct: 115 KKDGAAPAAGGGGPAAPAD--QNAKAATHDP 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,572,622
Number of Sequences: 27780
Number of extensions: 239696
Number of successful extensions: 563
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)