Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31790
(397 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) 30 0.59
SB_25159| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.78
SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) 29 1.4
SB_31084| Best HMM Match : Collagen (HMM E-Value=9.8) 29 1.8
SB_14896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_20349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_32272| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 27 5.5
SB_49029| Best HMM Match : Collagen (HMM E-Value=6.7) 27 5.5
SB_31932| Best HMM Match : DUF229 (HMM E-Value=1.4013e-45) 27 5.5
SB_28721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_27936| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_10591| Best HMM Match : Spp-24 (HMM E-Value=6) 27 7.3
SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08) 27 7.3
SB_24420| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 26 9.6
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 26 9.6
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 26 9.6
>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
Length = 979
Score = 30.3 bits (65), Expect = 0.59
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -2
Query: 282 TQILREPQELRFQCQCSSVDRFPEP*FRWRFHSRCCILRHQCCRCTCTDDDSVGNRADWG 103
T IL PQEL F +F +R + C HQ DD+ R +
Sbjct: 552 TTILNRPQELSFSFATGMPSKFGPQAPTYRLLTEACAENHQVPAVAKGDDEEHEKRPNRL 611
Query: 102 SDSYGDEESD 73
+SYG+ +
Sbjct: 612 HESYGNRRKN 621
>SB_25159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 186 SRCCILRHQCCRCTCTDDDSVGNRADWGSDSYGDEESDNEE 64
SR LR + C DDD+ G+ +D SY D++ +N++
Sbjct: 11 SRNVTLRPRYVTRGCDDDDNDGDGSDVCDGSYDDDDGENDD 51
>SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12)
Length = 1650
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 362 NVRXRRLESTLVSDVGHSVSNTVRADVRKFSANLKSFVFSANVLQLTGFLSLDSVGGF 189
N+ R+ + DV S NTV+ D++ +LKSFV S + S +V F
Sbjct: 894 NLVALRIAGRVPQDVTGSTRNTVQKDIQGIEDSLKSFVESVEATGNSDRRSAPTVSAF 951
>SB_31084| Best HMM Match : Collagen (HMM E-Value=9.8)
Length = 80
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 138 DDDSVGNRADWGSDSYGDEESDNEER 61
D+ +G R WG + G E+D +ER
Sbjct: 25 DEREMGTRGRWGREGNGGREADGDER 50
>SB_14896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 138 DDDSVGNRADWGSDSYGDEESDNEE 64
DDD N D G D YGD+ D+++
Sbjct: 111 DDDDDDNDDDDGDDDYGDDYDDDDD 135
>SB_20349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.5 bits (58), Expect = 4.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 141 TDDDSVGNRADWGSDSYGDEESDNEERF 58
+D D+ GN +D D D++ D+++ F
Sbjct: 51 SDSDNPGNNSDCNDDDDDDDDDDDDDEF 78
>SB_32272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 141 YKYNDNIGVEGYNTGYETSNGIKA 212
Y Y+ N + GY+TGY TS GI +
Sbjct: 98 YGYDFN-SLNGYHTGYSTSTGISS 120
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 141 TDDDSVGNRADWGSDSYGDEESDNEE 64
+D D GN D D Y +++ DN++
Sbjct: 446 SDSDDYGNNCDDDGDDYENDDDDNDD 471
>SB_49029| Best HMM Match : Collagen (HMM E-Value=6.7)
Length = 69
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 138 DDDSVGNRADWGSDSYGDEESDNE 67
DD G+ D GSD YGD + D++
Sbjct: 3 DDVVGGDDDDGGSDGYGDNDDDDD 26
>SB_31932| Best HMM Match : DUF229 (HMM E-Value=1.4013e-45)
Length = 572
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 159 CCRCTCTDDDSVGNRADWGSDSYGDEESD 73
C + TC DDD G+ D G D G ++ D
Sbjct: 442 CIKDTCGDDDG-GDDDDGGDDDDGGDDDD 469
>SB_28721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 144 CTDDDSVGNRADWGSDSYGDEESDNEERFHFD 49
C DDD N D D+YGD+ D++E D
Sbjct: 218 CDDDD---NLDDVNYDAYGDDNDDHDENDDVD 246
>SB_27936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 138 DDDSVGNRADWGSDSYGDEESDNE 67
D S G+R D D YGD DN+
Sbjct: 63 DSGSDGSRGDDNGDDYGDGSDDND 86
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 132 DSVGNRADWGSDSYGDEESDNEE 64
D+ G+ +D G D GD++ DN++
Sbjct: 287 DNDGDGSDGGGDDNGDDDGDNDD 309
>SB_10591| Best HMM Match : Spp-24 (HMM E-Value=6)
Length = 225
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 201 RWRFHSRCCILRHQCCRCTCTDDDSVGNRADWGSDSYGDEESDNEE 64
RWR C + + DDD G D GSD GD++ DN +
Sbjct: 142 RWR-GGLCLVDKSNIMERLWCDDDGGG---DDGSDDDGDDDGDNND 183
>SB_38004| Best HMM Match : CXCXC (HMM E-Value=5.5e-08)
Length = 240
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 246 QCQCSSVDRFPEP*FRWRFHSRCCILRHQCCRCTCTDD 133
+C CS R P +RWR + C C R C D+
Sbjct: 157 KCLCSPAQRCPL--YRWRNPNTCQCECQPCLRQICQDE 192
>SB_24420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 270 GEFAYIGPDGVTYAVTYVANEGG 338
G + YIGP G+ + T V G
Sbjct: 255 GSYCYIGPQGIVHGTTIVVMNAG 277
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 138 DDDSVGNRADWGSDSYGDEESDNEE 64
DDD N D D YGD E+ E+
Sbjct: 833 DDDDGDNDGDGDGDDYGDAENYGED 857
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 138 DDDSVGNRADWGSDSYGDEESDNEERFH 55
DDD G+ D D D++ D+++ FH
Sbjct: 494 DDDDDGDDDDDDDDDDNDDDDDDDDDFH 521
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -2
Query: 138 DDDSVGNRADWG--SDSYGDEESDNEE 64
DDD+ G+ D+ D YGD+++D+++
Sbjct: 325 DDDNDGDDDDYNYNDDDYGDDDNDDDD 351
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -2
Query: 138 DDDSVGNRADWG--SDSYGDEESDNEE 64
DDD+ G+ D+ D YGD+++D+++
Sbjct: 1838 DDDNDGDDDDYNYNDDDYGDDDNDDDD 1864
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.124 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,592,404
Number of Sequences: 59808
Number of extensions: 169782
Number of successful extensions: 645
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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