BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31790
(397 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 30 0.035
AF457546-1|AAL68776.1| 182|Anopheles gambiae 30 kDa protein pro... 22 7.1
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 29.9 bits (64), Expect = 0.035
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 186 YETSNGIKAQETGQLKNIGTENEALEVRGEFAYIGPDGVTYAVTYVAN 329
YE S + + TG +KN EV G+++ + DG V Y A+
Sbjct: 84 YEFSYSVHDEHTGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVDYHAD 131
>AF457546-1|AAL68776.1| 182|Anopheles gambiae 30 kDa protein
protein.
Length = 182
Score = 22.2 bits (45), Expect = 7.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 135 DDSVGNRADWGSDSYGDEESDNEE 64
DD+V D +S D E D+EE
Sbjct: 118 DDAVSGADDETEESKDDAEEDSEE 141
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.310 0.124 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,332
Number of Sequences: 2352
Number of extensions: 5093
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -