Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31790
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 29 1.6
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 29 1.6
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 29 1.6
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 29 1.6
Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF024492-1|AAF98622.2| 314|Caenorhabditis elegans Hypothetical ... 27 3.7
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 26 8.5
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 HQYKYNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGV 302
H K +D++G +G GY T +A L + + E+R GE ++ PD
Sbjct: 110 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 169
Query: 303 TYAVTYVANEGG 338
T A+EGG
Sbjct: 170 TQVTIEYASEGG 181
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 HQYKYNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGV 302
H K +D++G +G GY T +A L + + E+R GE ++ PD
Sbjct: 59 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 118
Query: 303 TYAVTYVANEGG 338
T A+EGG
Sbjct: 119 TQVTIEYASEGG 130
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 HQYKYNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGV 302
H K +D++G +G GY T +A L + + E+R GE ++ PD
Sbjct: 110 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 169
Query: 303 TYAVTYVANEGG 338
T A+EGG
Sbjct: 170 TQVTIEYASEGG 181
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 HQYKYNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGV 302
H K +D++G +G GY T +A L + + E+R GE ++ PD
Sbjct: 69 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 128
Query: 303 TYAVTYVANEGG 338
T A+EGG
Sbjct: 129 TQVTIEYASEGG 140
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 HQYKYNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGV 302
H K +D++G +G GY T +A L + + E+R GE ++ PD
Sbjct: 51 HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 110
Query: 303 TYAVTYVANEGG 338
T A+EGG
Sbjct: 111 TQVTIEYASEGG 122
>Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical
protein F26H11.5 protein.
Length = 238
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 177 NTGYETSNGIKAQETGQLKNIGTENEALE 263
NTG GI A+E+G+ + TE++ L+
Sbjct: 58 NTGLRRMPGISAEESGETQTFETEDDILD 86
>AF024492-1|AAF98622.2| 314|Caenorhabditis elegans Hypothetical
protein F14F9.5 protein.
Length = 314
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 174 YNTGYETSNGIKAQETGQLKNIG--TENEALEVRGEFAYIGPDGVTYAVTY 320
Y+T Y TSNGI+ T + N G EN ++ + PD V Y
Sbjct: 17 YSTSYSTSNGIRLM-TFNIWNSGANVENGQQKIAKHILMVNPDVVALQEVY 66
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 147 TCTDDDSVGNRADWGSDSYGDEESDNEER 61
T DDD R+ G+D D +SD++E+
Sbjct: 215 TKDDDDETFKRSKRGADDDDDNDSDSDEK 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.124 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,060,683
Number of Sequences: 27780
Number of extensions: 118927
Number of successful extensions: 336
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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