Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31787
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    28   0.039
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.28 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   3.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 28.3 bits (60), Expect = 0.039
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +2

Query: 278  VFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLXAF 415
            V Y K + + + +    YYA  F     T+ F  +H   GQFL  F
Sbjct: 1201 VNYKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFLGYF 1246


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 104  ILSFFQD--VSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGFMPKNLEFS 277
            +L+F ++     L+ D EY K    + ++ N    ++K+A   F++     F PKNL  S
Sbjct: 2426 VLAFIEEWNFDGLDLDWEYPKC---WQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLS 2482



 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 134  LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGFMPK 262
            L+ D EY K    + ++ N    ++K A  +F+K     F PK
Sbjct: 1940 LDLDWEYPKC---WQVDCNKGPASDKSAFADFVKELHEAFKPK 1979


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 101 KILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKK 214
           K +S    +S L+ D EYY   + YD E   D   NKK
Sbjct: 385 KGVSIMVPISGLHYDPEYYPDPEKYDPERFSDE--NKK 420


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 484 RVXFIRSRNNETVAIRALDTXDVEG 410
           +V F  S+N   V + +LDT D  G
Sbjct: 342 KVEFANSKNLGGVMVWSLDTDDFRG 366


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 484 RVXFIRSRNNETVAIRALDTXDVEG 410
           +V F  S+N   V + +LDT D  G
Sbjct: 342 KVEFANSKNLGGVMVWSLDTDDFRG 366


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 41   PKPSTIKTKNVDAVFVEKQKKILSFFQDVSQLNTDDE 151
            PKP     + ++    EK+ K+L+F    +Q   DDE
Sbjct: 1041 PKPDPNAVQKIEEKKPEKKDKVLTFLGANAQ---DDE 1074


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 41   PKPSTIKTKNVDAVFVEKQKKILSFFQDVSQLNTDDE 151
            PKP     + ++    EK+ K+L+F    +Q   DDE
Sbjct: 1041 PKPDPNAVQKIEEKKPEKKDKVLTFLGANAQ---DDE 1074


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 357 TRLPVLRVCIS 389
           T +PV+R+C+S
Sbjct: 477 TWMPVMRICVS 487


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 305 AIALFHLFYYAKDFETFYKTA 367
           A+++F    +  D   FYKTA
Sbjct: 53  AVSIFGSSSFEADLRQFYKTA 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,283
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)