Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31787
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein... 29 6.5
AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein... 29 6.5
AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein... 29 6.5
AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein... 29 6.5
AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein... 29 6.5
AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens ... 29 6.5
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 29 8.6
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 29 8.6
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 29 8.6
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 29 8.6
AF292062-1|AAG39077.1| 291|Homo sapiens general transcription f... 29 8.6
>BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 59 KTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
KT+ + + ++ Q K++ F + TDDE + K+Y I+ D
Sbjct: 286 KTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRD 331
>AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 59 KTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
KT+ + + ++ Q K++ F + TDDE + K+Y I+ D
Sbjct: 286 KTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRD 331
>AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 59 KTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
KT+ + + ++ Q K++ F + TDDE + K+Y I+ D
Sbjct: 229 KTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRD 274
>AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 59 KTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
KT+ + + ++ Q K++ F + TDDE + K+Y I+ D
Sbjct: 286 KTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRD 331
>AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 59 KTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
KT+ + + ++ Q K++ F + TDDE + K+Y I+ D
Sbjct: 229 KTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRD 274
>AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12577 fis, clone NT2RM4001047, highly similar to
MO25 PROTEIN. ).
Length = 289
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 59 KTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
KT+ + + ++ Q K++ F + TDDE + K+Y I+ D
Sbjct: 238 KTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRD 283
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 KPSTIKTKN--VDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
K T+K N VD E ++ S FQD DD+YY G+ Y+ E N D
Sbjct: 23 KKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 KPSTIKTKN--VDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
K T+K N VD E ++ S FQD DD+YY G+ Y+ E N D
Sbjct: 23 KKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 KPSTIKTKN--VDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
K T+K N VD E ++ S FQD DD+YY G+ Y+ E N D
Sbjct: 23 KKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 KPSTIKTKN--VDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMD 196
K T+K N VD E ++ S FQD DD+YY G+ Y+ E N D
Sbjct: 23 KKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>AF292062-1|AAG39077.1| 291|Homo sapiens general transcription
factor protein.
Length = 291
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +2
Query: 56 IKTKNVDAVFVEK-QKKILSFFQDVS-QLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEF 229
+K +FV + KK + FF D S Q + D+E+ K+ + ++ +MD ++ +EE+
Sbjct: 182 VKAXGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQKLWRSVTVD-SMD----EEKIEEY 236
Query: 230 LK 235
LK
Sbjct: 237 LK 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,127,832
Number of Sequences: 237096
Number of extensions: 1204442
Number of successful extensions: 2401
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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