Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31786
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   4.3  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   4.3  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   4.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   4.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   10.0 

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 71  NRLEQAYCNNIGIEFMFINSLEQ 139
           N  ++ YCNN    +  IN +EQ
Sbjct: 94  NNYKKLYCNNYKKLYYNINYIEQ 116


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 71  NRLEQAYCNNIGIEFMFINSLEQ 139
           N  ++ YCNN    +  IN +EQ
Sbjct: 94  NNYKKLYCNNYKKLYYNINYIEQ 116


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 71  NRLEQAYCNNIGIEFMFINSLEQ 139
           N  ++ YCNN    +  IN +EQ
Sbjct: 94  NNYKKLYCNNYRKLYYNINYIEQ 116


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 31  RRKRKSAPVERNSES 75
           +RKRKS+ +E  SE+
Sbjct: 215 KRKRKSSTIENESET 229


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 266 SSEKRFGLEGCEILIPAMK 322
           S  +   L GCE+L P  K
Sbjct: 305 SEARELQLPGCEVLCPLYK 323


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 266 SSEKRFGLEGCEILIPAMK 322
           S  +   L GCE+L P  K
Sbjct: 320 SEARELQLPGCEVLCPLYK 338


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 375 MPIMMDSTPSFVETSMTC 322
           +P+ +  TPS +  S TC
Sbjct: 563 LPLPLARTPSVMSASSTC 580


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,364
Number of Sequences: 438
Number of extensions: 3021
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)