Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31783
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    25   0.30 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   2.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   6.5  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 170 AHPFWYRHXPVGCTW--PGRQHRRTGS 96
           A P WY+H P+  T+   G+  +RTG+
Sbjct: 222 APPQWYQHQPLLFTYTDDGKNQQRTGT 248


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 327 VHFLYI*FRRLNTSISHVTVELS 395
           ++F    F RLN S+ H+ +ELS
Sbjct: 459 LYFQLCEFSRLNFSVEHLLMELS 481


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 139 TGXCRYQNGCATQPSCRS 192
           TG C +   C +Q SC +
Sbjct: 101 TGRCAFDGICCSQDSCHA 118


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 83  AICPNYPFCDADALAKYTPQGN 148
           A+ PN  F   +A   YTP+ N
Sbjct: 225 ALAPNLDFITLEAFDFYTPKRN 246


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 96  FGQMAGWSPAGY 61
           F    GWSPAG+
Sbjct: 81  FSSSVGWSPAGH 92


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +2

Query: 62  YPAGLHPAICPNYPFCDADALAKYTPQGNADTRMGAQP 175
           Y  G + A CP  P  D   L+   P G    +   +P
Sbjct: 87  YHLGSYAANCPPSPKDDEKCLSLERPSGGGKGKKMRKP 124


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 259 THTAGEYTSYLR*STTSQRFLRMY 330
           T    E  SY   +TTS  F+R++
Sbjct: 127 TFFVNEKQSYFHIATTSNEFIRVH 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,386
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)