Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31783
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 35 0.035
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 33 0.14
SB_28295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_20942| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 33 0.18
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 32 0.24
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_50698| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_54546| Best HMM Match : zf-CCHC (HMM E-Value=0.0024) 29 1.7
SB_34826| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 29 1.7
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_4795| Best HMM Match : CLN3 (HMM E-Value=0.058) 29 2.3
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 29 2.3
SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 3.0
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 5.3
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) 27 6.9
SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7) 27 6.9
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 35.1 bits (77), Expect = 0.035
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +3
Query: 21 SPSSLWPR*LWPASTQPDSTQPFAQTTRSAMLTPWPSTPHRXMPIPEWVRNPAILPIARA 200
+P + PR P +T P +T P +TT TP +TP P A LP+ A
Sbjct: 180 TPETTTPRTTTPVTTTPRTTTP--ETTTPETTTPRTTTPETTTPKKTTAAKKAPLPVTHA 237
Query: 201 ASNSVP 218
++ P
Sbjct: 238 TTSHAP 243
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 24 PSSLWPR*LWPASTQPDSTQPFAQTT-RSAMLTPWPSTPHRXMPIPEWVRNPAILPIARA 200
P + P+ + P P P M+ P+ + P M + ++ + P +LP+ +
Sbjct: 504 PQQMMPQQMMPQQMMPQQMMPQQMMPPMMPMMNPYMANP--LMQLQQYKKIPQMLPLKKE 561
Query: 201 ASNSVPKYPADFPAALCPNYPY 266
A +PK AALC PY
Sbjct: 562 ARKPIPKQ----AAALCVPTPY 579
>SB_28295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 223 IRLISRLPYALTTHTAGEYTSYLR*STTSQRFLRMYTFY 339
+RL+ Y +T T GEY Y +TT R L+ Y +Y
Sbjct: 64 VRLLQEYDYYSSTTTTGEYDYYRSTTTTGVRLLQEYDYY 102
>SB_20942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 223 IRLISRLPYALTTHTAGEYTSYLR*STTSQRFLRMYTFY 339
+RL+ Y +T T GEY Y +TT R L+ Y +Y
Sbjct: 31 VRLLQEYDYYRSTTTIGEYDYYRSTTTTGVRLLQEYDYY 69
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 202 RRILCPNIRLISRLPYALTTHTAGEYTSYLR*STTSQRFLRMYTFY 339
R + +RL+ Y ++T T GEY Y +T R L+ Y +Y
Sbjct: 151 RSMTTTGVRLLEEYEYYMSTTTRGEYDYYRSTTTIGVRLLQEYDYY 196
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 21 SPSSLWPR*LWPASTQPDSTQPFAQTTRSAMLTPWPSTPHRXMPIPEWVRNPAILPIARA 200
+P + PR P +T P++T P +TT P +TP P A LP+ A
Sbjct: 1781 TPETTAPRTTTPETTTPETTTP--RTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHA 1838
Query: 201 ASNSVP 218
++ P
Sbjct: 1839 TTSHAP 1844
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 54 PASTQPDSTQPFAQTTRSAMLTPWPST--PHRXMPIPEWVRNPAILP 188
P + QP P +T + L P P T P + +P PE ++ +LP
Sbjct: 1005 PETIQPQQLLPCPETIQPQQLLPCPETIPPQQLLPCPETIKPQQLLP 1051
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = +3
Query: 54 PASTQPDSTQPFAQT---TRSAMLTPWPSTPHRXMPIPEWVRNPAILPIARAASNSVPKY 224
P ST P T P T T TP P+TP P P+ P + + + P
Sbjct: 44 PTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPK-TPTPTTSTLTKPTPATTPTP 102
Query: 225 PADFPAALCPNYP 263
P A P P
Sbjct: 103 TKPTPTAHTPTTP 115
>SB_50698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 223 IRLISRLPYALTTHTAGEYTSYLR*STTSQRFLRMYTFY 339
+RL+ Y T T GEY Y +T R L+ Y +Y
Sbjct: 42 VRLLQEYDYYRNTTTTGEYDYYRSTTTIGVRLLQEYDYY 80
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 84 PFAQTTRSAMLTPWPSTPHRXMPIPEWVRNPAILPIARAASNSVPKYPADF 236
P Q ++++ P P R P+P V +P ++ A +SV ++PA +
Sbjct: 984 PSTQPSQASSPNPQPCEVTRPRPLPGLVTSPQLVLSPSTARSSVDEFPAQY 1034
>SB_54546| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
Length = 848
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -3
Query: 325 SAKTVDLLLISVGSLCIHQQYG*LGHRAAGKSAGYLGTEFDAARAIG 185
S TV +L IS G+ + + G GH A+ KS +G ++++ A+G
Sbjct: 608 SDTTVSVLAISKGNAVVCFRCGKRGHVASDKSFKAIGKKYNSCGAVG 654
>SB_34826| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 299
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 PAGLHPAICPNYPFCDADALAKYTPQGNADTRMGAQPSHPADRSSCVEF-CAQISG*FPG 241
PA + PA+ ++P+ + +A Y + +R A ++PA+ SS + A ++G G
Sbjct: 171 PASVSPAVAKSHPYTSSSTVA-YPYSSYSTSRTHANYNNPANYSSAASYGGAAVAG---G 226
Query: 242 CPMP*LPILLVNTQATYANQQQV 310
+ N A Y QQ +
Sbjct: 227 YHPQAYEAAVYNAAAAYVQQQHI 249
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = +3
Query: 30 SLWPR*LWPASTQPDSTQPFAQTTRSAMLTPWPSTPHRXMPIPEWVRN 173
SLWPR LWP S S P RS L PW P P W R+
Sbjct: 1614 SLWPRSLWPWSFWSRSLWP-----RS--LLPWSLWPRSLWPWSLWSRS 1654
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 15 SCSPSSLWPR*LWPASTQPDSTQPFAQTTRS 107
S P SLWPR LWP S S P + RS
Sbjct: 1634 SLLPWSLWPRSLWPWSLWSRSMWPRSLWPRS 1664
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 24 PSSLWPR*LWPAS 62
P SLWPR LWP S
Sbjct: 1657 PRSLWPRSLWPRS 1669
>SB_4795| Best HMM Match : CLN3 (HMM E-Value=0.058)
Length = 878
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +1
Query: 247 YALTTHTAGEYTSYLR*STTSQRFLRMYTFYIYNLED*THRSAMLLWNYHLISNKTLTAQ 426
Y +T HT YT + T + YT Y + + + H +SN T+TA+
Sbjct: 451 YTMTAHTGSNYT--MTAYTGFNYTMTAYTGSSYTMT--AYTGSNYTMTAHTVSNYTMTAR 506
Query: 427 HGLGITMHVQVAS-FISPSICGHSA*MRDLH 516
G TM S + + G + M LH
Sbjct: 507 TGSSYTMTAYTGSNYTMTAYTGSNFTMTALH 537
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +1
Query: 247 YALTTHTAGEYTSYLR*STTSQRFLRMYTFYIYNLED*THRSAMLLWNYHLISNKTLTAQ 426
Y +T HT YT + T S + YT Y + + + H +SN T+TA+
Sbjct: 761 YIMTGHTGSYYT--MTAYTVSSYTMTAYTGSNYTMT--AYTGSNYTMTAHTVSNYTMTAR 816
Query: 427 HGLGITMHVQVAS 465
G TM S
Sbjct: 817 TGSSYTMTAYTGS 829
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +1
Query: 247 YALTTHTAGEYTSYLR*STTSQRFLRMYTFYIYNLED*THRSAMLLWNYHLISNKTLTAQ 426
Y +T HT YT + T S + YT Y + T ++ +SN T+TA
Sbjct: 681 YTVTAHTGSNYT--MTAYTGSNYAMTAYTGSSYTMTAQT--GSIYTMKARTVSNYTMTAY 736
Query: 427 HGLGITMHVQVASF 468
G TM + S+
Sbjct: 737 TGSNYTMTARTGSY 750
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 21 SPSSLWPR*LWPASTQPDSTQPFAQTTRSAMLTPWPSTPHRXMPIP 158
+PSS P P+S QP+S QP +LT PSTP P P
Sbjct: 220 NPSSHQPSCYQPSSHQPNSHQP------QLLLTQLPSTPAPINPTP 259
>SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 850
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 488 PQIDGLIKEATWTCIVMPNPCWAVSVLLLIR 396
P + KE ++T +V + C+A+S+L+L+R
Sbjct: 595 PVVKAANKELSFTILVANSSCFALSILILVR 625
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 21 SPSSLWPR*LWPASTQPDSTQPFAQTTRSAMLTPWPSTPHRXMPIPEWVRNPAILPIARA 200
SPS+ + PAST+ S TT S +L P PS P LP+A++
Sbjct: 1048 SPSASVQPSVTPASTKSVSLTATPATTTSEVLEPSPSLTLSSSEAASSTLPPTSLPVAQS 1107
Query: 201 A-SNSVPKYPADFPAA 245
+ S S K A P++
Sbjct: 1108 STSTSTVKTAAVTPSS 1123
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 3 HVRXSCSPSSLWPR*LWPASTQPDSTQPFAQTTRSAMLTPWPSTPHRXMPIPEWVRNPAI 182
H SC ++ PR L P Q ++TQP A R + + H P+ R P+
Sbjct: 93 HTPPSCQSNT--PRPLTPPPRQSNTTQPPAYPPRQSYALQQTTPLHTSQPLRPTPRRPSD 150
Query: 183 LP 188
P
Sbjct: 151 TP 152
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -2
Query: 182 DGWVAHPFWYRHXPVGCTWPGRQHR 108
DGW H W + + W R HR
Sbjct: 2464 DGWTDHNEWLKREKLDFAWTSRTHR 2488
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +3
Query: 54 PASTQPDSTQPFAQ--TTRSAMLTPWPSTPHRXMPIPEWVRNPAILPIARAASNSVPK 221
P + QP + P AQ T R+ P+ +TP +P PI +VP+
Sbjct: 1755 PRTQQPPARAPPAQPPTYRNPAQAPFEATPREHLPKAPQASGQGAFPIGAIPRGAVPR 1812
>SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15)
Length = 272
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 123 WPSTPHRXMPIPEWVRNPAILPIARAASNSVPKYPADFPAAL 248
WP +PIP NP+ + + S+ P+ PAD +L
Sbjct: 162 WPLGLATPVPIPPLPTNPSQAQVKKDPSDEGPEIPADADGSL 203
>SB_19506| Best HMM Match : Viral_helicase1 (HMM E-Value=2.7)
Length = 828
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 106 ERVVWANGWVESGWVLAGQSYRGQSEDGE 20
ERV N WVE + ++ G+ EDGE
Sbjct: 167 ERVRRLNEWVEDNFDMSASHLAGKDEDGE 195
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,481,895
Number of Sequences: 59808
Number of extensions: 428753
Number of successful extensions: 990
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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