Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31782
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   4.4  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   5.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   5.8  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 LAQPGHQQNSIHYLLKCIFFLFMSCMQRDARVRSDIKGYH 341
           L +P     + + + K +F  F    Q  AR++    GYH
Sbjct: 205 LEEPLEDPATGNEIFKTVFVAFFQGEQLKARIKKVCTGYH 244


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 240 QQNSIHYLLKCIFFLFMSCMQRDARVRSDIKGYHF 344
           + +++H   K +  L     +++  VR  +KGY F
Sbjct: 187 KNSTLHVYEKDLCRLLPLSFEKEVTVRGGVKGYRF 221


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 246 NSIHYLLKCIFFLFMSCMQRDARVRSDIKGYH 341
           +S+H   K +F  F    Q  ARV+    GYH
Sbjct: 208 DSVH---KIVFVAFFQGEQLKARVKKVCAGYH 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,959
Number of Sequences: 2352
Number of extensions: 4439
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)