SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31779
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (gr...    36   0.013
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    35   0.031
Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical pr...    31   0.38 
U37429-11|AAA79352.1|  312|Caenorhabditis elegans Hypothetical p...    30   0.87 
Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z78540-6|CAD30431.1|  887|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z78540-5|CAB01738.2|  793|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z72501-3|CAD30430.1|  887|Caenorhabditis elegans Hypothetical pr...    28   2.7  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    28   2.7  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AJ133838-1|CAB44432.1|  793|Caenorhabditis elegans DYC-1 protein...    28   2.7  
AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical ...    28   2.7  
AL161712-8|CAC70133.1|  340|Caenorhabditis elegans Hypothetical ...    28   3.5  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z74031-3|CAA98455.1|  245|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p...    27   4.6  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    27   4.6  
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp...    27   4.6  
Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    27   6.1  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    27   6.1  
AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical ...    27   6.1  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z69637-3|CAA93468.1|  173|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (grd
           related) protein 6 protein.
          Length = 240

 Score = 35.9 bits (79), Expect = 0.013
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -1

Query: 340 PNPESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNP 221
           P P   CP P    P P  +CP P  CP  P P   CP P
Sbjct: 48  PMPMPVCPPPP---PCPAQFCPPPPICPPPPPPPMPCPPP 84



 Score = 34.3 bits (75), Expect = 0.040
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = -1

Query: 412 CPA-LSLPKLSSAESPKLPNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLPNPES 236
           CP  +  P++  A    +P P   CP P    P P  +CP P   CP P   P +P P  
Sbjct: 30  CPTPMCQPRMPCAAPMPMPMPMPVCPPPP---PCPAQFCP-PPPICPPPPP-PPMPCPPP 84

Query: 235 WCPNPE-SC 212
             P P  SC
Sbjct: 85  PPPMPRPSC 93


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 34.7 bits (76), Expect = 0.031
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -1

Query: 385 SSAESPKLPNPESWCPNPESWCPNPESWCPNPESWCPNPESC--PKLPNPESWCPNP 221
           S    P  P P   C  P   CP P   CP P+ +CP P  C  P  P P   CP P
Sbjct: 24  SMGPPPCPPPPPPMCAPPPLPCPPPPI-CP-PQ-FCPPPPMCPPPPPPPPPPMCPPP 77


>Z99279-6|CAB16498.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = -1

Query: 334 PESWCPNPESWCPNPESWCPNP---ESCPKLPNPESWCPNP 221
           PE   P PE   P PE   P P   E  P++P P    P P
Sbjct: 517 PEDPNPIPEDTVPGPEDTTPGPAVTEEIPEVPEPTEEPPTP 557



 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = -1

Query: 364 LPNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNP 221
           +P PE   P PE            PE   PNP     +P PE   P P
Sbjct: 493 VPEPEDPVPRPELATTTEGLPVQEPED--PNPIPEDTVPGPEDTTPGP 538


>Z82284-8|CAB05294.1|  640|Caenorhabditis elegans Hypothetical
           protein Y57G11A.2 protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = -1

Query: 334 PESWCPNPESWCPNPESWCPNP---ESCPKLPNPESWCPNP 221
           PE   P PE   P PE   P P   E  P++P P    P P
Sbjct: 517 PEDPNPIPEDTVPGPEDTTPGPAVTEEIPEVPEPTEEPPTP 557



 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = -1

Query: 364 LPNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNP 221
           +P PE   P PE            PE   PNP     +P PE   P P
Sbjct: 493 VPEPEDPVPRPELATTTEGLPVQEPED--PNPIPEDTVPGPEDTTPGP 538


>U37429-11|AAA79352.1|  312|Caenorhabditis elegans Hypothetical
           protein F09E5.12 protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 0.87
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -1

Query: 382 SAESPKLPNPESWCPN-PESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNPE 218
           +A SP L   ++  P  P    PN + W  +P  +  +P S P+ P P     NPE
Sbjct: 239 AARSPALARQQNDLPRRPIPLPPNRDHWTGHPTLYYNSPYSFPRRPRPND-RENPE 293


>Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical
           protein R102.6 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -1

Query: 319 PNPESWC-PNPESWCPNPESCPKLPNPESWCPNP 221
           P P   C P P   CP P  CP  P P   CP P
Sbjct: 244 PPPSPVCMPPPPPPCPMPIPCPP-PPPACSCPPP 276


>Z78540-6|CAD30431.1|  887|Caenorhabditis elegans Hypothetical
           protein C33G3.1b protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 370 PKLPNPESWCPNPESWCPNPESWCPNPESWCPN-PESCPKLP 248
           P +P P +  P+P +W P   S+  + +S   N P   P++P
Sbjct: 341 PNMPYPTATLPHPRTWAPQIPSYPNSMQSLEQNVPMYYPQMP 382


>Z78540-5|CAB01738.2|  793|Caenorhabditis elegans Hypothetical
           protein C33G3.1a protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 370 PKLPNPESWCPNPESWCPNPESWCPNPESWCPN-PESCPKLP 248
           P +P P +  P+P +W P   S+  + +S   N P   P++P
Sbjct: 247 PNMPYPTATLPHPRTWAPQIPSYPNSMQSLEQNVPMYYPQMP 288


>Z72501-3|CAD30430.1|  887|Caenorhabditis elegans Hypothetical
           protein C33G3.1b protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 370 PKLPNPESWCPNPESWCPNPESWCPNPESWCPN-PESCPKLP 248
           P +P P +  P+P +W P   S+  + +S   N P   P++P
Sbjct: 341 PNMPYPTATLPHPRTWAPQIPSYPNSMQSLEQNVPMYYPQMP 382


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 409 PALSLPKLSSAESPKLPNPESWCPNPESWCPNPESWCPNPESW 281
           P +  P++ S+    L NP +  P P S  PN  ++ PN ES+
Sbjct: 552 PRIPPPQIYSSPGQALFNPTNLYPTPPSSLPN--TYVPNQESF 592


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 409 PALSLPKLSSAESPKLPNPESWCPNPESWCPNPESWCPNPESW 281
           P +  P++ S+    L NP +  P P S  PN  ++ PN ES+
Sbjct: 552 PRIPPPQIYSSPGQALFNPTNLYPTPPSSLPN--TYVPNQESF 592


>AJ133838-1|CAB44432.1|  793|Caenorhabditis elegans DYC-1 protein
           protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 370 PKLPNPESWCPNPESWCPNPESWCPNPESWCPN-PESCPKLP 248
           P +P P +  P+P +W P   S+  + +S   N P   P++P
Sbjct: 247 PNMPYPTATLPHPRTWAPQIPSYPNSMQSLEQNVPMYYPQMP 288


>AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical
           protein B0205.10 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -1

Query: 379 AESPKLPNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNP 221
           A +P    P+   P PE+  P PE+  P P    P   +    P PE+  P P
Sbjct: 111 AAAPVQETPQV-APAPETPAPAPETPAPAPVQETPQVVAPAPEPTPEAAAPVP 162



 Score = 27.5 bits (58), Expect = 4.6
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -1

Query: 409 PALSLPKLSSAESPKLPNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLP-NPES 236
           P    P+++ A     P PE+  P P      P+   P PE   P PE+   +P +P+S
Sbjct: 114 PVQETPQVAPAPETPAPAPETPAPAPVQ--ETPQVVAPAPE---PTPEAAAPVPADPQS 167


>AL161712-8|CAC70133.1|  340|Caenorhabditis elegans Hypothetical
           protein Y66D12A.11 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -1

Query: 394 PKLSSAESPKLPNPESWCPNPESWCPNPESWCPNPESWCPNP 269
           P+  S  SP  P+P    PN      N + WC   E  CP P
Sbjct: 140 PRARSMTSPPPPHP----PNSFMSAENQKLWCKLYEQTCPPP 177


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
           protein Y40C5A.3 protein.
          Length = 2344

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = -1

Query: 394 PKLSSAESPKLPNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNPE 218
           P + S ESP  P P     NPE     P S    P    P   S P    PE   P P+
Sbjct: 568 PSMPSGESPAQPEPSIPAVNPEPSPSQPSS--SGPIQTAPPSPSSPN-AIPEGPPPGPD 623


>Z74031-3|CAA98455.1|  245|Caenorhabditis elegans Hypothetical
           protein F32D8.3 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -1

Query: 358 NPESWCPNPESWCPNPESWCPNPESWCPNPESCPK 254
           NP+ +C   E  C     +  N    C  PE CP+
Sbjct: 80  NPDPYCSKCEPGCTCRNGFVRNSLKLCVLPEECPR 114


>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
            K08F8.6 protein.
          Length = 2862

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = -1

Query: 409  PALSLPKLSSAESPKLPNPESWCP---NPESWCP-NPESWCPNPESWCPNPESCPKL--- 251
            P L+ P  S  +SP +P P +  P    P S  P  P ++   P S+ P   + P +   
Sbjct: 1205 PGLTTPMASIFQSPTMPPPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPPTTPTYPGMTPR 1264

Query: 250  PNPESWCPNP 221
            P P    P P
Sbjct: 1265 PGPNFGPPGP 1274


>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
            protein K08F8.6 protein.
          Length = 2862

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = -1

Query: 409  PALSLPKLSSAESPKLPNPESWCP---NPESWCP-NPESWCPNPESWCPNPESCPKL--- 251
            P L+ P  S  +SP +P P +  P    P S  P  P ++   P S+ P   + P +   
Sbjct: 1205 PGLTTPMASIFQSPTMPPPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPPTTPTYPGMTPR 1264

Query: 250  PNPESWCPNP 221
            P P    P P
Sbjct: 1265 PGPNFGPPGP 1274


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -1

Query: 361 PNPESWCPNPESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNPE 218
           P+PE    + E   P+PE   P+P    P P   P+ P P    P PE
Sbjct: 522 PSPEESDDDQELILPSPE---PSPVRE-PTPPPPPREPTPREPTPEPE 565


>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
            subunit Med13 protein.
          Length = 2862

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = -1

Query: 409  PALSLPKLSSAESPKLPNPESWCP---NPESWCP-NPESWCPNPESWCPNPESCPKL--- 251
            P L+ P  S  +SP +P P +  P    P S  P  P ++   P S+ P   + P +   
Sbjct: 1205 PGLTTPMASIFQSPTMPPPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPPTTPTYPGMTPR 1264

Query: 250  PNPESWCPNP 221
            P P    P P
Sbjct: 1265 PGPNFGPPGP 1274


>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 334 PESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNPESC 212
           P + C   + +C NP++   + ++  K+   ES C N ++C
Sbjct: 560 PGAQCSPSQGYCCNPDTCSLHGKNEEKICRQESECSNLQTC 600


>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
           protein C09F9.2 protein.
          Length = 1642

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
 Frame = -1

Query: 343 CPNPESW--CPNPESWCPNPESWCPNPESCPKLPN 245
           C   E W  CP     C +   W   PE+ P  PN
Sbjct: 320 CGPNEQWSECPESSRECEHSCDWTHFPETTPNCPN 354


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 328 SWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNPESC 212
           S CPN +  C  P  +  NP  C +    ++ CP  + C
Sbjct: 171 SGCPNGDCGCGRPCCYYQNPTCCNQ--GQKACCPPEQPC 207


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 334 PESWCPNPESWCPNPESWCPNPESCPKLPNPESWCPNPESC 212
           P + C   + +C NP++   + ++  K+   ES C N ++C
Sbjct: 560 PGAQCSPSQGYCCNPDTCSLHGKNEEKICRQESECSNLQTC 600


>AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical
           protein W06H8.4 protein.
          Length = 351

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = -1

Query: 445 PWSAKLXISF-TCPALSLPKLSSAESPKLPNP--ESWCPNPESWCPNPESWCP-NPESWC 278
           P  A L +S  T PA+S    ++  +   P    +S   N E   PN     P  P + C
Sbjct: 27  PAQASLPVSSPTRPAVSSTSKTTPHTTLKPRTTKKSTASNKERKDPNCPFGSPLKPTTGC 86

Query: 277 PNPESCPKLPNPESWCPNPESC 212
            N   C    N  ++C   E C
Sbjct: 87  SNQHECQTSMNLNAYCSPKEIC 108


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = -1

Query: 358 NPESWCPNPESWCPNPESWCPNPES-WCPNPESC-PKLPNPESWCPNPESC 212
           N E  C      C NPE  CP P++  C     C P        C   +SC
Sbjct: 802 NEEYRCEKCAGTCKNPEPNCPGPKNKSCKRACICAPGFVKENGKCVTLDSC 852


>Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical
           protein ZK1010.5 protein.
          Length = 756

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = -1

Query: 445 PWSAKLXISFTCPALSLPKLSSAESP--KLPNPESWCPNPESWCPNPE-SWCPNPESWCP 275
           P +++  +S    AL      + E P  ++PNP+   P+P S  P PE    P P +  P
Sbjct: 552 PATSEEPLSTASTALPDETTDAPEEPATEVPNPQP--PSPPSPEPEPEPKSTPEPVTDGP 609

Query: 274 NPESCPKLPNPESWCP 227
           N      LP   +  P
Sbjct: 610 NESQSTALPQQTTDAP 625


>Z69637-3|CAA93468.1|  173|Caenorhabditis elegans Hypothetical
           protein F35G2.3 protein.
          Length = 173

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 384 RARSHQSYRI--RSRGVQIRSHGVQIRNHGVQIRSHGVQIRSHARSYRIQSRGVQIQNRA 211
           +A++H   ++   S    I+ H  +++    +I +H ++IR H R +  +  G+Q + + 
Sbjct: 27  KAKAHYQLKLMCESSEEMIKEHQKEMKIERSKISNHLIKIRMHQRDFVAKIGGLQRKLKE 86

Query: 210 RS 205
           R+
Sbjct: 87  RN 88


>AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical
           protein F55A3.1 protein.
          Length = 958

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 382 SAESPKLPNPESWCPNPESWCPNPES 305
           S ++   P+  S  PNPE  CP P S
Sbjct: 15  SVDASNRPSTSSENPNPEEPCPQPPS 40



 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 319 PNPESWCPNPESWCPNPESCP 257
           P+  S  PNPE  CP P S P
Sbjct: 22  PSTSSENPNPEEPCPQPPSDP 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,510,646
Number of Sequences: 27780
Number of extensions: 165966
Number of successful extensions: 828
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -