Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31779
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    26   0.21 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.49 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   0.65 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   0.65 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   0.65 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.0  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   8.0  

>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = -2

Query: 300 VQIRSHGVQIRSHARSYR--IQSRGVQIQNRARSFRIRSHVQSHRT-QSHDRNYRIQGCD 130
           ++I S G  +R     +   +QS G+  +     FR+  H Q H T      NY    C+
Sbjct: 154 IEIESFGYTMRDIRYKWNAGLQSVGISNEVELPQFRVLGHRQRHSTIHLSTGNYSRLACE 213

Query: 129 FQ 124
            Q
Sbjct: 214 IQ 215


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 189 HVQSHRTQSHDRNYRIQGCDFQSRQIRNHDQNCR 88
           H+QS   Q H R Y+ Q    Q +Q R  ++  R
Sbjct: 150 HLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLR 183


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 198 IRSHVQSHRTQSHDRNYRIQGCDFQSRQIRNHDQNCR 88
           I+SH ++  T    R YR+    F    + N D+N +
Sbjct: 475 IQSHAKAKNTMIKARQYRLNHKPFTYHIVVNSDKNVK 511


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 198 IRSHVQSHRTQSHDRNYRIQGCDFQSRQIRNHDQNCR 88
           I+SH ++  T    R YR+    F    + N D+N +
Sbjct: 475 IQSHAKAKNTMIKARQYRLNHKPFTYHIVVNSDKNVK 511


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 198 IRSHVQSHRTQSHDRNYRIQGCDFQSRQIRNHDQNCR 88
           I+SH ++  T    R YR+    F    + N D+N +
Sbjct: 101 IQSHAKAKNTMIKARQYRLNHKPFTYHIVVNSDKNVK 137


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 280 CPNPESCPKLPNPE 239
           CP   +CP  PNP+
Sbjct: 213 CPPTLACPLNPNPQ 226


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 324 GVQIRNHGVQIRSHGVQIRSHARSYRIQSR 235
           G++IRN      +  VQ   H  S +IQSR
Sbjct: 236 GLKIRNSTKDTLNSVVQGAIHGDSRQIQSR 265


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 111  RNHDQNCRSRYDQNQNCRI 55
            RNHDQN  S  D  ++  I
Sbjct: 1865 RNHDQNNSSFNDSKESNEI 1883


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = -2

Query: 210 RSFRIRSHVQSHRTQSHDRNYRIQGCDFQSRQIR 109
           R+F     ++ H    H+++  +  C+F +R+ R
Sbjct: 13  RNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYR 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,644
Number of Sequences: 438
Number of extensions: 2173
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)