Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31773
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 366 e-102
SB_56| Best HMM Match : Actin (HMM E-Value=0) 366 e-102
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 366 e-102
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 365 e-101
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 347 2e-96
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 8e-49
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 2e-45
SB_54| Best HMM Match : Actin (HMM E-Value=0) 145 2e-35
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 133 9e-32
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 108 2e-24
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 98 3e-21
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 57 7e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.001
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.74
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.3
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 30 1.3
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 2.3
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 3.0
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 5.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 366 bits (900), Expect = e-102
Identities = 169/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAIL
Sbjct: 125 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 366 bits (900), Expect = e-102
Identities = 169/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAIL
Sbjct: 125 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 176
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 366 bits (900), Expect = e-102
Identities = 169/172 (98%), Positives = 172/172 (100%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAIL
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL 177
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 365 bits (897), Expect = e-101
Identities = 167/172 (97%), Positives = 172/172 (100%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 6 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 177
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 347 bits (854), Expect = 2e-96
Identities = 161/168 (95%), Positives = 166/168 (98%), Gaps = 2/168 (1%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 6 IAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 498
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 190 bits (462), Expect = 8e-49
Identities = 86/171 (50%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
Frame = +1
Query: 4 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 177
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 178 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 354
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 355 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 507
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPH 177
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 178 bits (434), Expect = 2e-45
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 VAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTF 258
LTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 117 bits (281), Expect = 7e-27
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +1
Query: 331 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 510
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 511 IL 516
I+
Sbjct: 138 II 139
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 145 bits (352), Expect = 2e-35
Identities = 65/91 (71%), Positives = 77/91 (84%)
Frame = +1
Query: 238 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 417
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 418 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 510
ASGRTTG V D GDGVSHTVP+Y+GY LPHA
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 10 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 111
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 133 bits (321), Expect = 9e-32
Identities = 55/77 (71%), Positives = 72/77 (93%)
Frame = +1
Query: 286 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 465
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 466 SHTVPIYEGYALPHAIL 516
SH+VPIYEG+A+PH+I+
Sbjct: 186 SHSVPIYEGFAMPHSIM 202
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 108 bits (260), Expect = 2e-24
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +1
Query: 352 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAIL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAIL 55
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/107 (39%), Positives = 71/107 (66%)
Frame = +1
Query: 196 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 375
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 376 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIV 109
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 10 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 111
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 57.2 bits (132), Expect = 7e-09
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 181 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 354
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 355 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 513
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 124 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 303
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 433 TGIVLDSGDGVSHTVPI 483
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +1
Query: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRG 177
A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G
Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSG 761
Query: 178 ILTL 189
++ L
Sbjct: 762 VMHL 765
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 397 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 513
Q LSLYASG T G+ L SG + IYEG+ L H +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTL 805
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -1
Query: 108 VARATHDGREDGAGRVVAGETGLAHAGAIVD 16
+AR+ DG E+G+G +V+GETGLAH GAI+D
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIID 31
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 8/49 (16%)
Frame = +1
Query: 391 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAI 513
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 241 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 420
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 421 SGRTTGIV 444
+GIV
Sbjct: 572 YSAVSGIV 579
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 4 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 108
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 17 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 163
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 187 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 339
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 328 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 444
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 113 PWWRGRPTMDGKTARGASSPAKPALHMPEPLSTTSAA 3
P W + G T R PAKP+L++P P S T ++
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKTPSS 566
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 348 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 169
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 168 AL 163
++
Sbjct: 214 SV 215
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 107 WRGRPTMDGKTARGASSPAKPALHMPEPLSTTSAA 3
W + G T R PAKPAL++P P S T ++
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSPPSKTPSS 106
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 83 GKTARGASSPAKPALHMPEPLSTTSAA 3
G T R PAKPAL++P P S T ++
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKTPSS 106
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 2.3
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 473 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 321
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 320 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 156
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 516 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 418
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 331 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 480
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 316 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 444
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 482 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 306
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 305 VSSTGCSSGATRSSL*KVW 249
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 509 AWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMIWVIFSLL 330
+W P T W +PSP+ T P ++T+W + +S++ +I L
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLS 160
Query: 329 ALGLR 315
+ R
Sbjct: 161 GVHYR 165
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -2
Query: 407 STAWMATYMAGELKVSNMIWV---IFSLLALGL 318
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 510 GVGQSVTFVDGYGVGDTISGVEHDTGG 430
GV S G+G G TISG D+GG
Sbjct: 1495 GVVTSRMICGGFGAGSTISGCFGDSGG 1521
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,806,792
Number of Sequences: 59808
Number of extensions: 333318
Number of successful extensions: 1300
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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