Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31773
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 350 4e-97
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 349 5e-97
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 349 5e-97
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 349 7e-97
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 349 7e-97
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 349 9e-97
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 344 2e-95
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 344 2e-95
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 344 2e-95
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 325 1e-89
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 264 2e-71
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 233 7e-62
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 195 1e-50
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 143 7e-35
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 140 5e-34
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 101 4e-22
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 97 8e-21
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 87 5e-18
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 86 2e-17
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 44 5e-05
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 44 5e-05
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.9
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 1.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.9
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 28 3.2
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 4.3
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 4.3
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 5.7
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 5.7
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.5
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 27 7.5
At3g32904.1 68416.m04164 hypothetical protein 27 7.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.5
At5g07730.1 68418.m00886 expressed protein 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 350 bits (860), Expect = 4e-97
Identities = 161/172 (93%), Positives = 167/172 (97%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGI
Sbjct: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 349 bits (859), Expect = 5e-97
Identities = 161/172 (93%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGI
Sbjct: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 349 bits (859), Expect = 5e-97
Identities = 161/172 (93%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGI
Sbjct: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 349 bits (858), Expect = 7e-97
Identities = 160/172 (93%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGI
Sbjct: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 349 bits (858), Expect = 7e-97
Identities = 160/172 (93%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGI
Sbjct: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 349 bits (857), Expect = 9e-97
Identities = 161/172 (93%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGI
Sbjct: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 127 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 344 bits (846), Expect = 2e-95
Identities = 155/172 (90%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGI
Sbjct: 7 IQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAIL
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 344 bits (846), Expect = 2e-95
Identities = 155/172 (90%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGI
Sbjct: 7 IQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAIL
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 344 bits (846), Expect = 2e-95
Identities = 155/172 (90%), Positives = 166/172 (96%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 180
+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGI
Sbjct: 7 IQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGI 66
Query: 181 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 360
LTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAIL
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAIL 178
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 325 bits (798), Expect = 1e-89
Identities = 143/170 (84%), Positives = 162/170 (95%)
Frame = +1
Query: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 186
A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++RGIL+
Sbjct: 10 AIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILS 69
Query: 187 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 366
LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+
Sbjct: 70 LKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFES 129
Query: 367 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL
Sbjct: 130 FAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 179
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 264 bits (648), Expect = 2e-71
Identities = 120/169 (71%), Positives = 141/169 (83%)
Frame = +1
Query: 10 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 189
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 190 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 369
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 370 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 516
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH IL
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGIL 167
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 233 bits (569), Expect = 7e-62
Identities = 103/133 (77%), Positives = 121/133 (90%)
Frame = +1
Query: 118 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 297
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 298 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 477
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 478 PIYEGYALPHAIL 516
PIYEG ALPHAIL
Sbjct: 121 PIYEGSALPHAIL 133
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 195 bits (476), Expect = 1e-50
Identities = 84/168 (50%), Positives = 117/168 (69%), Gaps = 2/168 (1%)
Frame = +1
Query: 10 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 183
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 184 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 363
+ YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 364 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 507
+N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 143 bits (346), Expect = 7e-35
Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 22/194 (11%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS---- 144
V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 7 VSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTES 66
Query: 145 ---------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 294
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P EHP
Sbjct: 67 EKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126
Query: 295 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 474
+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G +
Sbjct: 127 MLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTI 186
Query: 475 VPIYEGYALPHAIL 516
P+++GY L A++
Sbjct: 187 SPVHDGYVLQKAVV 200
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 140 bits (339), Expect = 5e-34
Identities = 81/195 (41%), Positives = 112/195 (57%), Gaps = 26/195 (13%)
Frame = +1
Query: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 132
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 133 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 303
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 304 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVS 468
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
Query: 469 HTVPIYEGYALPHAI 513
H VP+ EGY + I
Sbjct: 185 HVVPVAEGYVIGSCI 199
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 101 bits (241), Expect = 4e-22
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 16/130 (12%)
Frame = +1
Query: 1 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------MGQ 135
V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + G+
Sbjct: 7 VSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGK 66
Query: 136 KDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 312
+ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL E
Sbjct: 67 RKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEP 126
Query: 313 PLNPKANREK 342
PLN + REK
Sbjct: 127 PLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 96.7 bits (230), Expect = 8e-21
Identities = 68/169 (40%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Frame = +1
Query: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 183
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 184 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 360
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 361 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 507
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEG-AVQH 160
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 87.4 bits (207), Expect = 5e-18
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Frame = +1
Query: 10 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 189
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 190 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 369
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 370 NSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAI 513
++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAI 179
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 85.8 bits (203), Expect = 2e-17
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Frame = +1
Query: 10 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 189
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 190 -----KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 351
+ P + ++ ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 352 IMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEG 492
++FET+ PA+ + A S L+ + GIVL G +H++P +G
Sbjct: 138 LLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDG 189
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +1
Query: 253 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 402
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 403 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 492
VL+LYA+ RT+GIV++ G V +PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +1
Query: 253 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 402
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 403 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 492
VL+LYA+ RT+GIV++ G V +PI G
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHG 270
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 348 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 241
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1
Query: 360 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 235
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 154 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 333
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 334 REK 342
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 154 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 333
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 334 REK 342
REK
Sbjct: 225 REK 227
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 20 TMAPACARPVSPATTRPAPSSRPSWVA 100
+MAP PVSP T+ PAP S V+
Sbjct: 202 SMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 491 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 315
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 314 GASVSST---GCSSGAT 273
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 113 PWWRGRPTMDG--KTARGASSPAKPALHM 33
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 360 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 235
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 17 STMAPACARPVSPATTRPAPSSRP 88
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +1
Query: 220 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 399
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 400 AVLSLYASGRTTGIVLDSGD 459
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 131 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPLST 15
P P I P RG G T+ +SSPA+P + +P +ST
Sbjct: 290 PTPDIKPT-RGLIVYQGATS--SSSPAEPLMPVPNDMST 325
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 158 SSPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 30
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 220 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 369
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 173 LLLWASSPT*ESFWPIPTITPWWRGRPTMDGKTARG 66
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTWFSK-TIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,956,860
Number of Sequences: 28952
Number of extensions: 231978
Number of successful extensions: 932
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -