Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31771
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      33   0.001
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      33   0.001
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.24 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   1.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    20   6.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    20   6.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 15  SPGHLLKXFPSASITSPTRTDTSPLVMLSPL-PHQCLXXSL 134
           SPG ++   PS S+ SP+ +  SP ++ SPL PH+     L
Sbjct: 695 SPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKL 735


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 15  SPGHLLKXFPSASITSPTRTDTSPLVMLSPL-PHQCLXXSL 134
           SPG ++   PS S+ SP+ +  SP ++ SPL PH+     L
Sbjct: 587 SPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKL 627


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 5    QGSFSWTSPEGVPISVNYVADXNGYQPTGNAIPTSPPV 118
            QGS S  S EGVP+    V   +G    G+    SPPV
Sbjct: 1095 QGSSS--SSEGVPLKGTAVPPPSGSSGPGSTGSKSPPV 1130


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 12  HSPGHLLKXFPSASITSPTRTDTSPLVMLSPLPHQ 116
           HSP   +    S SIT PT+T       L+P P +
Sbjct: 24  HSPQQSI--IVSGSITQPTKTVIQSKRPLAPAPER 56


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 354 YFIYTCIXITHYEY 313
           Y IY C  ++++EY
Sbjct: 195 YNIYVCQTVSNFEY 208


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 354 YFIYTCIXITHYEY 313
           Y IY C  ++++EY
Sbjct: 121 YNIYVCQTVSNFEY 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,304
Number of Sequences: 336
Number of extensions: 1061
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)