Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31770
         (385 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re...    42   0.004
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    35   0.61 

>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
           Troponin I - Drosophila melanogaster (Fruit fly)
          Length = 269

 Score = 41.9 bits (94), Expect = 0.004
 Identities = 19/22 (86%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
 Frame = +1

Query: 1   KPDWSKGKPGDQKVKEE-EVEA 63
           KPDWSKGKPGD KVKEE E EA
Sbjct: 248 KPDWSKGKPGDAKVKEEVEAEA 269


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 34.7 bits (76), Expect = 0.61
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 335 KKTRGGARYPIRPIVSR 385
           ++ RGGARYPIRPIVSR
Sbjct: 257 RRPRGGARYPIRPIVSR 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,573,887
Number of Sequences: 1657284
Number of extensions: 6079763
Number of successful extensions: 7667
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7667
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)