Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31769
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q57BR4 Cluster: AsmA family protein; n=6; Brucellaceae|...    34   2.2  
UniRef50_A5FGA4 Cluster: Putative uncharacterized protein precur...    32   6.8  
UniRef50_Q0CER3 Cluster: Putative uncharacterized protein; n=2; ...    32   8.9  

>UniRef50_Q57BR4 Cluster: AsmA family protein; n=6;
           Brucellaceae|Rep: AsmA family protein - Brucella abortus
          Length = 645

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 404 NSILVVRRQVIEDLRASSGELRFNVKSI 487
           N IL    Q++ DL+++SGELRFN   I
Sbjct: 437 NGILQANVQIVRDLKSASGELRFNASDI 464


>UniRef50_A5FGA4 Cluster: Putative uncharacterized protein
           precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
           Putative uncharacterized protein precursor -
           Flavobacterium johnsoniae UW101
          Length = 352

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 24/90 (26%), Positives = 41/90 (45%)
 Frame = +2

Query: 140 IVAVTAITSARFLNTPQQTLFVVI*HVNQINNLSRTHLIERPNPCGLVSDPTLRENLTLN 319
           + A+T+I ++   +      F     +N I  + +   I+  N  G +S P    +  +N
Sbjct: 97  VTAITSIGNSSLKSKGSNNSF----EINYIIKIPKNGGIKLVNKYGNISVPNAEASTDIN 152

Query: 320 RHNCKFNSVA*SGRIFASNNAVH*AFCVNS 409
              CK+  V   G++  SNN V  A+C NS
Sbjct: 153 ---CKYGKVT-LGKLNGSNNQVEIAYCQNS 178


>UniRef50_Q0CER3 Cluster: Putative uncharacterized protein; n=2;
           Aspergillus|Rep: Putative uncharacterized protein -
           Aspergillus terreus (strain NIH 2624)
          Length = 1384

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 481 FDIKTKLSTRRSKIFDHLSPDD 416
           FD+K+K+S RR+K  D LSP D
Sbjct: 168 FDVKSKISPRRNKYKDDLSPSD 189


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,981,051
Number of Sequences: 1657284
Number of extensions: 8716708
Number of successful extensions: 17549
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17542
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)