Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31769
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.5  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   10.0 
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   10.0 
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   10.0 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   10.0 
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   10.0 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   10.0 

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 79  VTCWKVDRRV*GSIINSASNYRSGYRNN 162
           V+C  +DR     +I+S    R+ Y+++
Sbjct: 312 VSCLVIDRETFNQLISSLDEIRTRYKDS 339


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 151 YRNNIRPFPKHTPTNAV 201
           Y N I P P   P NA+
Sbjct: 209 YDNGIDPLPLGCPVNAI 225


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 169 PFPKHTPTNAVRCDMTRKP 225
           PFP+  P NA R    + P
Sbjct: 155 PFPRFIPPNAYRFRPPQNP 173


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 169 PFPKHTPTNAVRCDMTRKP 225
           PFP+  P NA R    + P
Sbjct: 155 PFPRFIPPNAYRFRPPQNP 173


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 163 IRPFPKHTPTNAVR 204
           + PFP+  P NA R
Sbjct: 151 LTPFPRFIPPNAYR 164


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 163 IRPFPKHTPTNAVR 204
           + PFP+  P NA R
Sbjct: 392 LTPFPRFIPPNAYR 405


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 169 PFPKHTPTNAVRCDMTRKP 225
           PFP+  P NA R    + P
Sbjct: 393 PFPRFIPPNAYRFRPPQNP 411


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 215 HVNQINNLSRTHLIERPNPCGLVS 286
           H  +++   R H  ERP+ C + S
Sbjct: 159 HSGKLHRHMRIHTGERPHKCTVCS 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,369
Number of Sequences: 438
Number of extensions: 3051
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)