Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31767
(324 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein L21|Sch... 66 9e-13
SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein L21|Sc... 66 1e-12
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.30
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 28 0.30
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 27 0.70
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 26 1.2
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 2.1
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 2.8
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 25 3.7
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 25 3.7
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 25 3.7
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 24 4.9
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 24 6.5
SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|... 24 6.5
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 24 6.5
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 24 6.5
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 23 8.6
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 8.6
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 23 8.6
>SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 160
Score = 66.5 bits (155), Expect = 9e-13
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 13 RINIRVEHVKHSKCRQDFLKRVKXE*GGY*R*AKVCRQXPSTWKRQPAPPKAAHIVS-GT 189
R+N+R+EHVKHSKCRQDFL RVK R + +RQPAPP AH VS
Sbjct: 88 RVNVRIEHVKHSKCRQDFLDRVKANEAK--RKEAKAQGKTVQLRRQPAPPATAHFVSTEN 145
Query: 190 EKPVLLAPIPYE 225
+PV L P+ Y+
Sbjct: 146 NEPVTLHPVAYD 157
>SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 66.1 bits (154), Expect = 1e-12
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 13 RINIRVEHVKHSKCRQDFLKRVKXE*GGY*R*AKVCRQXPSTWKRQPAPPKAAHIVS-GT 189
R+N+R+EHVKHSKCRQDFL RVK R + +RQPAPP AH VS
Sbjct: 88 RVNVRIEHVKHSKCRQDFLDRVKANEAK--RKEAKAQGKTVQLRRQPAPPAKAHFVSTEN 145
Query: 190 EKPVLLAPIPYE 225
+PV L P+ Y+
Sbjct: 146 NEPVTLHPVAYD 157
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 0.30
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 23 SVLSMSSTPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRDSQLPLKLPTSSVELRN 196
S LS+ + + +S+ S + E K + QP + PLK T SVEL N
Sbjct: 171 STLSLYGNQAFNPSSVLPSNSSSTPKENKKNVNKETYQPNTFRRSPLKNDTGSVELSN 228
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.3 bits (60), Expect = 0.30
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 23 SVLSMSSTPSADKTSLRESKXNEEATEGKPRSA 121
++L SSTPS T R + E +EG+P S+
Sbjct: 133 ALLEASSTPSTYATPSRPTAQKSETSEGEPESS 165
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 27.1 bits (57), Expect = 0.70
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 32 SMSSTPSA-DKTSL-RESKXNEEATEGKPRSAGKXRQPGRDSQLPLKLPTSSVELRNP 199
S+ ST SA D + + S N++ + G PR+A R P+ PT R P
Sbjct: 449 SLDSTHSAPDPNHISKPSVVNQQKSRGGPRTAKLKNDLRRIQSSPIVAPTPDTSFREP 506
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 1.2
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 32 SMSSTPSADKTSLRESKXNEEATEGKPRSAGK 127
SMSS+P+A +TSLR+ E T +SA K
Sbjct: 163 SMSSSPTASRTSLRKG-AGELETHSAVKSAKK 193
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.4 bits (53), Expect = 2.1
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Frame = +2
Query: 38 SSTPSADKTSLRESKXNEEAT------EGKPRSAGKXRQPGRDSQLPLKLPTSSVELRNP 199
S P A+ T+LR+ + T EGK +P + P +V L NP
Sbjct: 68 SEFPDAENTNLRKQQDTLPTTGFNNLPEGKAGMQTLPGRPASNGPTPPNPGNGNVGLNNP 127
Query: 200 SYL 208
SY+
Sbjct: 128 SYM 130
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.0 bits (52), Expect = 2.8
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = +2
Query: 41 STPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRDSQLPLKLPTSSVELRNPSYLRLSH 220
S+P ++ S E + A K Q DS+ +SS+ L + L L H
Sbjct: 887 SSPDTVHPGIKRSHFIRERVKQLLSDANKHHQSPSDSETDRTPDSSSIHLPHIERLNLFH 946
Query: 221 TNS 229
T S
Sbjct: 947 TKS 949
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 24.6 bits (51), Expect = 3.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 171 GSFRGSWLSLPG*RXLPADLGLPSVASSFXFDSLKEVLSALGVLDMLNTDIDAXRY 4
G+F G L G +P GLP+ + + L +SAL +L L D R+
Sbjct: 181 GAFGG--LIATGLTKIPKSSGLPNWGWLYIIEGLISAISALWILFCLPDDPSTARF 234
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 24.6 bits (51), Expect = 3.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 101 EGKPRSAGKXRQPGRDSQLPLKLPTSSVELRNP 199
E K G RQP R ++ L+ S+EL NP
Sbjct: 378 EAKLSMIGLPRQPNRSYEIMLQHLKVSMELSNP 410
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 24.6 bits (51), Expect = 3.7
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = -1
Query: 198 GFLSSTDDVGSFRGSWLSLPG*RXLPADLGLPS---VASSFXFDSLKEVLSALGVLDMLN 28
GF S+T SF+G W+ LP L +G+ S ++SL EV ++ + L+
Sbjct: 445 GFASATILPMSFQGGWIDLPIAFILGCLVGILQHYIAPRSTMYNSLFEVTGSI-ITSFLS 503
Query: 27 TDIDAXRYN 1
+ RY+
Sbjct: 504 RAFGSIRYS 512
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 24.2 bits (50), Expect = 4.9
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 41 STP--SADKTSLRESKXNEEATEGKPRSAGKXRQPGRDS 151
STP S KTS + + N EGK + +G + G +
Sbjct: 556 STPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNST 594
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 23.8 bits (49), Expect = 6.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 53 ADKTSLRESKXNEEATEGKPRSAGKXRQPGR 145
A T S EATEGK S G+ R R
Sbjct: 46 AGSTGAEVSDVTAEATEGKESSNGEDRHTKR 76
>SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 572
Score = 23.8 bits (49), Expect = 6.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 148 QPAPPKAAHIVSGTEKPVLLA 210
Q A +A IV+G +KPVLLA
Sbjct: 207 QMAVDISAKIVNGKQKPVLLA 227
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 41 STPSADKTSLRESKXNEEATEGKPR 115
S+ AD++S+R S+ + GKPR
Sbjct: 228 SSSRADRSSVRRSQSFKNRRNGKPR 252
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 53 ADKTSLRESKXNEEATEGKPRSAGKXRQPGRDS 151
+D S+ E ++A++G A PGRD+
Sbjct: 390 SDPVSILEQHIGDKASQGTFSGANSGLNPGRDN 422
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 23.4 bits (48), Expect = 8.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 114 LGLPSVASSFXFDSLKEVLSALGVLDMLNT 25
L PSV + FDS+K +L + +L + T
Sbjct: 221 LNKPSVPGEYKFDSIKPLLQKI-ILSSIRT 249
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.4 bits (48), Expect = 8.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 41 STPSADKTSLRESKXNEEATEGKPRSA 121
+TP+ D S SK +++ KPR A
Sbjct: 276 ATPAKDTASKEPSKSSQQPVRTKPRIA 302
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 23.4 bits (48), Expect = 8.6
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +1
Query: 4 IPXRINIRVEHVKHSKCRQD 63
+P ++N++++HV H +D
Sbjct: 36 VPDKVNVKLQHVFHYGLNED 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,225,206
Number of Sequences: 5004
Number of extensions: 20660
Number of successful extensions: 74
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 87815546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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