Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31767
(324 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18) 35 0.017
SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.12
SB_36907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.66
SB_53280| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_1824| Best HMM Match : Cupin_3 (HMM E-Value=1.6) 26 6.1
SB_44368| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_41191| Best HMM Match : PadR (HMM E-Value=8.6) 26 8.1
SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25) 26 8.1
SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30) 26 8.1
>SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18)
Length = 212
Score = 34.7 bits (76), Expect = 0.017
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
TP DKT R+ + T+G+ ++ G+ + PGRD
Sbjct: 124 TPGRDKTPGRDKTPGRDKTQGRDKTQGRDKTPGRD 158
Score = 34.7 bits (76), Expect = 0.017
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
TP DKT R+ + T+G+ ++ G+ + PGRD
Sbjct: 130 TPGRDKTPGRDKTQGRDKTQGRDKTPGRDKTPGRD 164
Score = 33.9 bits (74), Expect = 0.030
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
TP DKT R+ + T G+ ++ G+ + PGRD
Sbjct: 136 TPGRDKTQGRDKTQGRDKTPGRDKTPGRDKTPGRD 170
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 29 LSMSSTPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
L TP DKT R+ + T G+ ++ G+ + GRD
Sbjct: 107 LGRDKTPGRDKTPGRDKTPGRDKTPGRDKTPGRDKTQGRD 146
Score = 31.1 bits (67), Expect = 0.21
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 29 LSMSSTPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
L + T DKT R+ + T G+ ++ G+ + PGRD
Sbjct: 101 LGRNKTLGRDKTPGRDKTPGRDKTPGRDKTPGRDKTPGRD 140
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
T DKT R+ + T G+ ++ G+ + PGRD
Sbjct: 142 TQGRDKTQGRDKTPGRDKTPGRDKTPGRDKTPGRD 176
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
TP DKT R+ + T G+ ++ G+ + GRD
Sbjct: 118 TPGRDKTPGRDKTPGRDKTPGRDKTQGRDKTQGRD 152
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRD 148
T DKT R+ + T G+ ++ G+ + PGRD
Sbjct: 148 TQGRDKTPGRDKTPGRDKTPGRDKTPGRDKTPGRD 182
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 44 TPSADKTSLRESKXNEEATEGKPRSAGKXRQPGR 145
TP DKT R+ + T G+ ++ G+ + GR
Sbjct: 154 TPGRDKTPGRDKTPGRDKTPGRDKTPGRDKTQGR 187
>SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1082
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 8 RXASISVLSMSSTPSADKTSLRESKXNEEATEGKPRSAGKXRQPGR 145
R I +L STPS+ K+ ++ N E EGKP++ + ++ R
Sbjct: 173 RDCEIIILDDDSTPSSLKSKESHTEKNGEGKEGKPQNTSESKEERR 218
>SB_36907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.5 bits (63), Expect = 0.66
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 65 SLRESKXNEEATEGKPRSAGKXRQPGRDSQLPLKLPTSSVELRNP-SYLRLSHTNS*R 235
S+ +K + AT P + QPGR + P P S + NP + +SHTN R
Sbjct: 3 SMLTNKTTKSATNINPINTSN--QPGRTATAPQPTPKGSASVPNPATQSMVSHTNGIR 58
>SB_53280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 8 RXASISVLSMSSTPSADKTSLRESKXNEEATE---GK-PRSAGKXRQ-PGRDSQLPLKLP 172
R S+S S S P D + + S N EA GK G R GR S +PLK+P
Sbjct: 45 RSRSVSPHSSSLIPDGDPVARKYSAGNIEAASENFGKRSEMLGAGRNNAGRSSPVPLKMP 104
Query: 173 T 175
+
Sbjct: 105 S 105
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 130 PSTWKRQPAPPKAAHIVSGTEKPVLLAPIP 219
P +WK QP+P + S KP+ L P+P
Sbjct: 869 PPSWKSQPSPSARPQVNS---KPLSLKPVP 895
>SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1558
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 17 SISVLSMSSTPSADKTSLRESKXNEEATEGKPRSAGKXRQPGRDSQL 157
S++ ++ S++ + + RESK A GKPR G G + +
Sbjct: 1183 SVASIANSNSSTGSARAARESKGGALAMNGKPRQKGDSSSIGSGASM 1229
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +2
Query: 56 DKTSLRESKXNEEATEGKPRSAGKXRQPGR--------DSQLPLKLPTSSVELRNPSYLR 211
D+ LR + N+ E RSAG +PG+ + + P K P + + S +R
Sbjct: 571 DEKDLRPNTRNDSPPERHERSAGPVTRPGKRPSPVPQQNKEPPSKKPKPLLSAKELSEIR 630
Query: 212 LSH 220
L H
Sbjct: 631 LHH 633
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 89 EEATEGKPRSAGKXRQPGRDSQLPLKLPTSS 181
+ A +GKP S K R G +P+K P+ +
Sbjct: 613 DSAVKGKPASKKKTRPHGSADSVPVKTPSKT 643
>SB_1824| Best HMM Match : Cupin_3 (HMM E-Value=1.6)
Length = 305
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 157 PPKAAHIVSGTEKPVLLAPIPYE 225
PP A + ++ ++PVL P+P++
Sbjct: 138 PPPAYYTITSNQEPVLNMPVPWQ 160
>SB_44368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 71 LRKSCLHLECLTCSTRILMRFG 6
L K C H+EC C + + +G
Sbjct: 147 LEKLCQHIECEVCKATVFIPYG 168
>SB_41191| Best HMM Match : PadR (HMM E-Value=8.6)
Length = 276
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 204 TCAYPIRIRSVKSNKIFLRTKKKKKNSRGGPV 299
+C++P S KS I TK+ + N+ P+
Sbjct: 38 SCSFPENATSTKSKLIHSNTKRDRNNNLSAPM 69
>SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 640
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 38 SSTPSADKTSLRESKXNEEATEGKPRSAGKXR-QPGRDSQLPLKLPTSSVELRNPSYLR 211
S P+ + E + + TE + + + QP D + P E R PSYL+
Sbjct: 577 SDQPTQSASEATEISDSTDKTEEESKETANAKPQPREDQETPELRERPKRERRKPSYLK 635
>SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30)
Length = 1084
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 236 YATNSYGIGASKTGFSVPLTMW 171
YA +SY IGA+ T SV L+ W
Sbjct: 286 YAGHSYRIGAAITAASVGLSPW 307
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,566,638
Number of Sequences: 59808
Number of extensions: 166000
Number of successful extensions: 557
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 438034835
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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