Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31760
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         318   9e-89
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         318   9e-89
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         318   9e-89
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          309   4e-86
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   0.66 
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   4.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   4.6  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           23   8.1  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  318 bits (780), Expect = 9e-89
 Identities = 146/157 (92%), Positives = 150/157 (95%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
           MCD++VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
           SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
           T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  318 bits (780), Expect = 9e-89
 Identities = 146/157 (92%), Positives = 150/157 (95%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
           MCD++VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
           SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
           T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  318 bits (780), Expect = 9e-89
 Identities = 146/157 (92%), Positives = 150/157 (95%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
           MCD++VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
           SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
           T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  309 bits (758), Expect = 4e-86
 Identities = 142/157 (90%), Positives = 146/157 (92%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
           MCDDD  ALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
           SKRGILTLKYPIEHGIITNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPK+NRE M
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120

Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
           T IMFETF +PA+YVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSG 157


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 159 PSPPGRDGRYGPERL--LRG*RGPE 227
           P P GRDG +GP  L   +G RG E
Sbjct: 346 PGPRGRDGNFGPVGLPGQKGDRGSE 370


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 242 RIPLLLWASSPT*ESFWPIPTIT 174
           R P     S+PT  S W  PTIT
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTIT 152


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 242 RIPLLLWASSPT*ESFWPIPTIT 174
           R P     S+PT  S W  PTIT
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTIT 152


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 44  ACATTMLLRL*STMAPACARPVSPATTRPAPXSRXSXVALAT 169
           A ATT +    +T+AP     V+P TT      + +   +A+
Sbjct: 30  APATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAS 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,541
Number of Sequences: 2352
Number of extensions: 8649
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)