Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31760
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 321 2e-88
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 319 6e-88
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 319 6e-88
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 319 6e-88
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 319 6e-88
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 319 6e-88
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 319 6e-88
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 319 6e-88
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 305 1e-83
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 280 4e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 232 1e-61
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 193 5e-50
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 180 7e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 178 2e-45
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 178 2e-45
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 176 7e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 148 2e-36
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 121 3e-28
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 91 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 9e-05
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 31 0.37
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.0
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 148/157 (94%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDDDVAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 319 bits (784), Expect = 6e-88
Identities = 147/157 (93%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 319 bits (784), Expect = 6e-88
Identities = 147/157 (93%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 319 bits (784), Expect = 6e-88
Identities = 147/157 (93%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 319 bits (784), Expect = 6e-88
Identities = 147/157 (93%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 319 bits (784), Expect = 6e-88
Identities = 146/157 (92%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDDDVAAL++DNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 157
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 319 bits (784), Expect = 6e-88
Identities = 147/157 (93%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 319 bits (784), Expect = 6e-88
Identities = 147/157 (93%), Positives = 150/157 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXM 405
SKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
T IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 157
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 305 bits (748), Expect = 1e-83
Identities = 138/155 (89%), Positives = 147/155 (94%)
Frame = +1
Query: 52 DDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSK 231
++++AALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTX 411
RGILTLKYPIEHGI+TNWDDME IWHHTFYNELR+APEEHPVLLTEAPLNPK+NRE MT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 412 IMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
IMFETFN+PAMYV IQAVLSLYASGRTTG VLD+G
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTG 156
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 280 bits (687), Expect = 4e-76
Identities = 129/139 (92%), Positives = 132/139 (94%)
Frame = +1
Query: 100 KAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 279
+AGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 280 NWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETFNSPAMYVAIQ 459
NWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT IMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 460 AVLSLYASGRTTGXVLDSG 516
AVLSLYASGRTTG VLDSG
Sbjct: 125 AVLSLYASGRTTGVVLDSG 143
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 232 bits (567), Expect = 1e-61
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1
Query: 178 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPV 357
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDME IWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 358 LLTEAPLNPKANREXMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
LLTEAPLNPKANRE MT IMFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSG 113
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 193 bits (471), Expect = 5e-50
Identities = 89/159 (55%), Positives = 116/159 (72%), Gaps = 4/159 (2%)
Frame = +1
Query: 52 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEA 222
D DV A +V+DNGSG+ KAGFAG+ P+ F GRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 223 QSKRGILTLKYPIEHGIITNWDDMEXIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 399
+S RG+ +++YP+EHGI+ NW DME IW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 400 XMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
I FETFN PA+Y+ +QAVLSLYA+GRTTG VLDSG
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSG 160
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 180 bits (437), Expect = 7e-46
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDDDVAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXI 303
SKRGILTLKYPIEHGI+TNWDDME I
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 178 bits (433), Expect = 2e-45
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXI 303
SKRGILTLKYPIEHGI+TNWDDME I
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 178 bits (433), Expect = 2e-45
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDD+VAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDMEXI 303
SKRGILTLKYPIEHGI+TNWDDME I
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 176 bits (429), Expect = 7e-45
Identities = 79/83 (95%), Positives = 80/83 (96%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCDDDVAALVVDNGSGMCKAGFAGDDAPRA FP I GRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYPIEHGIITNWDDM 294
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 148 bits (359), Expect = 2e-36
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 3/152 (1%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 243
+VVDNG+G K G+AG + P FP + GRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 244 TLKYPIEHGIITNWDDMEXIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREXMTXIMF 420
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NRE M +MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 421 ETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
E + ++YVA+QAVL+LYA G TG V+DSG
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSG 160
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 121 bits (292), Expect = 3e-28
Identities = 72/178 (40%), Positives = 96/178 (53%), Gaps = 21/178 (11%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAXFPX-IXGRPR-----------HQGVMVGM 189
M + A V+DNG+G K G+AG+ P+ P I + + + V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 190 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLT 366
D ++GDEA S T+KYPI HGI+ +WD ME W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 367 EAPLNPKANREXMTXIMFETFNSPAMYVAIQAVLSLYASGRT--------TGXVLDSG 516
E PLN NRE IMFE+FN P +Y+A+QAVL+L AS + TG V+DSG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSG 178
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.1 bits (216), Expect = 4e-19
Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEA--QS 228
D+V+ LV D GS + GFAG++ P+ P Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 229 KR------GILTLKYP---------IEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLL 363
KR G + P ++ G+I +W+ E I H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 364 TEAPLNPKANREXMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
+E+ N +A RE +T IMFE F PA Y++ VLS +A GRT G ++DSG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 43.6 bits (98), Expect = 9e-05
Identities = 30/123 (24%), Positives = 53/123 (43%)
Frame = +1
Query: 61 VAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 240
+ ++ DNG K G ++PR P + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 241 LTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMF 420
++ PIE G + NWD + IW TF + V + LT+ A + + I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 421 ETF 429
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 43.6 bits (98), Expect = 9e-05
Identities = 30/123 (24%), Positives = 53/123 (43%)
Frame = +1
Query: 61 VAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 240
+ ++ DNG K G ++PR P + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 241 LTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMF 420
++ PIE G + NWD + IW TF + V + LT+ A + + I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 421 ETF 429
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.5 bits (68), Expect = 0.37
Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 2/151 (1%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDA--PRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 243
L+++ GS +AG + P++ FP I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 244 TLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFE 423
+E I D ++ + EL+V P ++ VLL+ P + I E
Sbjct: 241 ATDPSVERYSIDK-DVLKAVIGKVT-KELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 424 TFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
+ + Q L LYA TTG V+D G
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIG 329
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 191 PIPTITPWWRGRPXMXGKXARGASSPAKPALHMPEPL 81
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 77 STMAPACARPVSPATTRPAPXSR 145
+T AP PATTRPAP S+
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQ 339
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 345 LGGDTQLIVEGVVPDXLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 178
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 345 LGGDTQLIVEGVVPDXLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 178
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 345 LGGDTQLIVEGVVPDXLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 178
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 515 PESSTIPVVRPEAYSESTAWMATYMAGEL 429
P SST+PVV P ++ T +Y+A L
Sbjct: 868 PLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,082,446
Number of Sequences: 27780
Number of extensions: 195604
Number of successful extensions: 783
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -