Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31760
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 294 2e-80
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 294 3e-80
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 294 3e-80
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 293 3e-80
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 293 3e-80
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 293 5e-80
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 293 5e-80
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 293 5e-80
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 293 5e-80
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 268 1e-72
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 215 1e-56
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 190 4e-49
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 160 6e-40
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 121 3e-28
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 110 5e-25
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 96 1e-20
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 81 4e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 72 3e-13
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 68 3e-12
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 37 0.007
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 37 0.007
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 29 1.4
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 28 3.2
At2g44550.1 68415.m05543 glycosyl hydrolase family 9 protein 27 5.7
At2g44540.1 68415.m05541 glycosyl hydrolase family 9 protein 27 5.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 27 5.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 27 5.7
At3g03870.2 68416.m00400 expressed protein predicted using genef... 27 7.5
At3g03870.1 68416.m00399 expressed protein predicted using genef... 27 7.5
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 7.5
At5g07730.1 68418.m00886 expressed protein 27 9.9
At3g32904.1 68416.m04164 hypothetical protein 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 294 bits (722), Expect = 2e-80
Identities = 135/154 (87%), Positives = 142/154 (92%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+D+ LV DNG+GM KAGFAGDDAPRA FP I GRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHGI++NWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 294 bits (721), Expect = 3e-80
Identities = 135/154 (87%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+D+ LV DNG+GM KAGFAGDDAPRA FP I GRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHGI+ NWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 294 bits (721), Expect = 3e-80
Identities = 135/154 (87%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+D+ LV DNG+GM KAGFAGDDAPRA FP I GRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHGI+ NWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 293 bits (720), Expect = 3e-80
Identities = 134/154 (87%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+D+ LV DNG+GM KAGFAGDDAPRA FP I GRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHGI+ NWDDME IWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 293 bits (720), Expect = 3e-80
Identities = 134/154 (87%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+D+ LV DNG+GM KAGFAGDDAPRA FP I GRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHGI+ NWDDME IWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFN+PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 293 bits (719), Expect = 5e-80
Identities = 135/154 (87%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+D+ LV DNG+GM KAGFAGDDAPRA FP I GRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHGI++NWDDME IWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFN PAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 293 bits (719), Expect = 5e-80
Identities = 132/154 (85%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
DD+ +V DNG+GM KAGFAGDDAPRA FP + GRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHG+++NWDDME IWHHTFYNELR+APEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFNSPAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 293 bits (719), Expect = 5e-80
Identities = 132/154 (85%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
DD+ +V DNG+GM KAGFAGDDAPRA FP + GRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHG+++NWDDME IWHHTFYNELR+APEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFNSPAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 293 bits (719), Expect = 5e-80
Identities = 132/154 (85%), Positives = 141/154 (91%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
DD+ +V DNG+GM KAGFAGDDAPRA FP + GRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GILTLKYPIEHG+++NWDDME IWHHTFYNELR+APEEHPVLLTEAPLNPKANRE MT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFETFNSPAMYVAIQAVLSLYASGRTTG VLDSG
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSG 158
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 268 bits (658), Expect = 1e-72
Identities = 117/154 (75%), Positives = 137/154 (88%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
D+ A+V DNG+GM KAGFAGDDAPRA FP + GRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 235 GILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXI 414
GIL+LKYPIEHG+++NWDDME IWHHTFYNELR+ PEEHP+LLTEAPLNPK NRE MT I
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 415 MFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFE+F P+MY+ IQAVLSLY+SGRTTG VLDSG
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSG 159
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 215 bits (525), Expect = 1e-56
Identities = 99/149 (66%), Positives = 117/149 (78%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 249
+V D G GM +AGFAGD+AP+ FP + GRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 250 KYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 429
K P+EHGI+ NWDDME IWH+TFYNELRV PEEHPVLLTEAP NPKANRE MT IMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 430 NSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
+ PAMYV++Q+VL LY+SGRTTG VLD G
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLG 147
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 190 bits (464), Expect = 4e-49
Identities = 83/113 (73%), Positives = 100/113 (88%)
Frame = +1
Query: 178 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPV 357
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDME IW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 358 LLTEAPLNPKANREXMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
LLTEAPLNPKA+RE MT IMFETF P+MY+ +QA LSL+ASGRTTG VLDSG
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSG 113
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 160 bits (388), Expect = 6e-40
Identities = 72/156 (46%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRP--RHQGVMVGMGQKDSYVGDEAQS 228
D+ +V DNG+G K GFAG++ P + FP + GRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 229 KRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMT 408
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NRE M
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 409 XIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
MFE +N +++ IQAVL+LYA G TG V+DSG
Sbjct: 122 ETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSG 157
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 121 bits (291), Expect = 3e-28
Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 22/176 (12%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVM--------VGMGQKDS-- 204
D+V+A+VVD GS CKAG+AG+DAP+A FP + G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 205 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEE 348
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 349 HPVLLTEAPLNPKANREXMTXIMFETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
HP+LL E PLN + RE +MFE + PA+++A VL+ +A+GR T V+D G
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCG 180
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 110 bits (265), Expect = 5e-25
Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 26/176 (14%)
Frame = +1
Query: 67 ALVVDNGSGMCKAGFAGDDAPRAXFPXIXG-----------------RPRHQ-GVMVGMG 192
A+V+DNG+G K GFAG+ P P + + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 193 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLL 363
D Y+GDEA +K R T L YPIEHG + +WD ME W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 364 TEAPLNPKANREXMTXIMFETFNSPAMYVAIQAVLSLYASGRT-----TGXVLDSG 516
TE+PL P +RE I+FETFN P +Y+A+ +VL+L A T TG V+D G
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVG 180
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 95.9 bits (228), Expect = 1e-20
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 16/131 (12%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVG---------------M 189
D+V+A+VVD GS CKAG+AG+DAP+A FP + G G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 190 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLT 366
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 367 EAPLNPKANRE 399
E PLN + RE
Sbjct: 125 EPPLNSQQQRE 135
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 81.0 bits (191), Expect = 4e-16
Identities = 60/152 (39%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +1
Query: 67 ALVVDNGSGMCKAGFA-GDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 243
ALVVD GS KAG A D +P P R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 244 TLKYPIEHGIITNWDDMEXIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREXMTXIMF 420
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE + +MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 421 ETFNSPAMYVAIQAVLSLYASGRTTGXVLDSG 516
ETFN Y + QAVLSLYA GR +G +D G
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIG 144
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 71.7 bits (168), Expect = 3e-13
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 249
+V+DNG G+ KAG G+ P P +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 250 KYPIEHGIITNWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETF 429
+ PI+ G + N D IW H F + L +AP +LLTEAPL+ + + ++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 430 NSPAMYVA-IQAVLSLYASGRTTGXVL 507
++Y+A Q+++ LY + R +L
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSIL 148
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 68.1 bits (159), Expect = 3e-12
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAXFPXIXGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 249
+V+DNG+ + G+AG+ PR F I RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 250 -----KYPIEHGIITNWDDMEXIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREXMTX 411
+ P + ++ ++ ME I + F + +HP+L+TE NP +R M
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 412 IMFETFNSPAMYVAIQAVLS 471
++FET+ PA+ + A S
Sbjct: 138 LLFETYGVPAVAFGVDAAFS 157
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Frame = +1
Query: 313 TFYNELRVAPEEHPVLLTEAPL-------NPKANREXMTXIMFETF---NSPAMYVAIQA 462
T + ++V P P++++ PL + KA+R + +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 463 VLSLYASGRTTGXVLDSG 516
VL+LYA+ RT+G V++ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Frame = +1
Query: 313 TFYNELRVAPEEHPVLLTEAPL-------NPKANREXMTXIMFETF---NSPAMYVAIQA 462
T + ++V P P++++ PL + KA+R + +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 463 VLSLYASGRTTGXVLDSG 516
VL+LYA+ RT+G V++ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 80 TMAPACARPVSPATTRPAPXSRXSXVA 160
+MAP PVSP T+ PAP S V+
Sbjct: 202 SMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 408 GHXLPVGLGVEGGFGXQHGVLLGGDTQLIVEGVVPD 301
G+ + VG+G+ GG G GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At2g44550.1 68415.m05543 glycosyl hydrolase family 9 protein
Length = 490
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -1
Query: 129 GRVVAGETGLAHAGAIVDYKRS-----NIVVAHA*TLCVFVLGHAGI 4
G +AGET A A A + + S NI++ HA L F H G+
Sbjct: 177 GSDLAGETAAAMAAASIAFAPSDKAYANILIGHAKDLFAFAKAHRGL 223
>At2g44540.1 68415.m05541 glycosyl hydrolase family 9 protein
Length = 491
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -1
Query: 129 GRVVAGETGLAHAGAIV-----DYKRSNIVVAHA*TLCVFVLGHAGI 4
G +AGET A A A + D +NI++ HA L F H G+
Sbjct: 177 GSDLAGETAAAMAAASIAFAPFDKAYANILIGHAKDLFAFAKAHPGL 223
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +1
Query: 214 DEAQSKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAP 342
D A L++KY + H I + W + IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +1
Query: 214 DEAQSKRGILTLKYPIEHGIITNWDDMEXIWHHTFYNELRVAP 342
D A L++KY + H I + W + IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g03870.2 68416.m00400 expressed protein predicted using
genefinder
Length = 266
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 135 GAGRVVAGETGLAHAGAIVDYKRSNIVVAHA*TLCVFVLGHAGI 4
G R+ + GL GAI + V A A T+CVF LGH I
Sbjct: 169 GGERLNLWKAGLNGIGAICSFG----VAAAAATVCVFFLGHNNI 208
>At3g03870.1 68416.m00399 expressed protein predicted using
genefinder
Length = 234
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 135 GAGRVVAGETGLAHAGAIVDYKRSNIVVAHA*TLCVFVLGHAGI 4
G R+ + GL GAI + V A A T+CVF LGH I
Sbjct: 169 GGERLNLWKAGLNGIGAICSFG----VAAAAATVCVFFLGHNNI 208
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +1
Query: 280 NWDDMEXIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTXIMFETFNSPAMYVAIQ 459
+W +E + + + + P LL EA + PK+ E +++TF + ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 460 AVLSLYASGRTTGXVL 507
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 233 LLLWASSPT*ESFWPIPTITPWWRGRPXMXGKXARG 126
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTWFSK-TIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 218 SSPT*ESFWPIPTITPWWRGRPXMXGKXARGASSPAKPALHMP 90
+SP+ W IP TP W G P + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTP---SSMPQWSSSPTAPQLSSP 325
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.133 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,737,964
Number of Sequences: 28952
Number of extensions: 187083
Number of successful extensions: 581
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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