Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31757
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    29   0.032
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.5  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 0.032
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 27  KICMFTCECFLNCKSYLLTKPSTICNIFTKFLIVVFILINKIFIVYSKRYI 179
           K C +  + F    S +  KP+ +       L+ +   I +I+ VY +RY+
Sbjct: 7   KTCFYVAKFFAITPSSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRYM 57


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 56  KTFTCKHADFI 24
           KTF CK  DF+
Sbjct: 200 KTFKCKQCDFV 210


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 36  MFTCECFLNCKSYLLTKPSTICNIFTKFLIVVFIL 140
           +  C+ +L  K Y   K    C I   F+I +++L
Sbjct: 19  LLICDSYL--KIYHKEKYRKFCRILKYFIIAIYVL 51


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  YKICMFTCECFLNCKSYLL 80
           +KI      C++NC  YL+
Sbjct: 210 FKIIQVVPYCYINCLIYLI 228


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 54  FLNCKSYLLTKPSTICNIFT 113
           F   KSY  T   T+ NI+T
Sbjct: 4   FSKVKSYFTTHHDTLHNIYT 23


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 54  FLNCKSYLLTKPSTICNIFT 113
           F   KSY  T   T+ NI+T
Sbjct: 4   FSKVKSYFTTHHDTLHNIYT 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,702
Number of Sequences: 336
Number of extensions: 1917
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)