Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31756
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.50 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.50 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 220 LETILNFNFQFSIFHGRQKNTFTAPNKVY 134
           L  +L     F+I  G +KN  T P K+Y
Sbjct: 6   LRLVLKVGHFFAITPGFRKNRTTCPEKIY 34


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 220 LETILNFNFQFSIFHGRQKNTFTAPNKVY 134
           L  +L     F+I  G +KN  T P K+Y
Sbjct: 6   LRLVLKVGHFFAITPGFRKNRTTCPEKIY 34


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 455 FTFDARIWDEISAWEHV 405
           F+ + ++W +I AW ++
Sbjct: 32  FSLEHQLWQKIQAWTYL 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,080
Number of Sequences: 336
Number of extensions: 2480
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)