Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31756
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003383-1|AAB54234.1|  379|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc...    27   5.7  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U39993-2|AAK72059.1|  744|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>AF003383-1|AAB54234.1|  379|Caenorhabditis elegans Hypothetical
           protein ZC250.2 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = +3

Query: 333 WGNTCLVARYI*DTFTDG*ETLNV----DVFPCGDLVPYACVECKIEFP 467
           W    + A+Y    F    E L +    D F CGD +    V+C I FP
Sbjct: 98  WSGFAIDAKYEFAQFLHKWENLRLHHHPDYFCCGDTIDSCIVKCSIPFP 146


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
           protein K03H1.5 protein.
          Length = 1385

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 341 HMFSCALYLRHLYGWVGNTKRGRVPMR 421
           H F  A Y   ++ W+GNTK   V  R
Sbjct: 191 HSFVAAFYADAMFQWIGNTKISNVFFR 217


>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
           cyclase protein 19 protein.
          Length = 1143

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 119 WGLVSDPKENAPDRFPFPFNVF-TLLAFGF 33
           WGLV+D K    +R+P+  N+    L+ GF
Sbjct: 95  WGLVTDSKFTDTERYPYLTNIMANSLSLGF 124


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
           protein F54F11.2 protein.
          Length = 1589

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 393 TLNVDVFPCGDLVPYACVECK--IEFPIQ*NNNT 488
           ++N+ V PC D   Y C   K  + F I  N+NT
Sbjct: 107 SVNLSVDPCNDFYAYTCGNFKGDMSFDISDNSNT 140


>U39993-2|AAK72059.1|  744|Caenorhabditis elegans Hypothetical
           protein F47E1.2 protein.
          Length = 744

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -1

Query: 140 GLHTTLLWGLVSDPK--ENAPDRFPFPFNVFTLLAFGFVNVXPWNL 9
           G  T  L  ++ D K  E   + +PF    F+LL  G     PW+L
Sbjct: 238 GKLTNSLRAVIKDSKCKEQTSNSYPFLVFFFSLLLLGIGRTVPWSL 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,136,900
Number of Sequences: 27780
Number of extensions: 226121
Number of successful extensions: 485
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)