Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31755
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   4.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 262 FSASPAVAFSTARPAAASLFF 200
           FS  PA    TAR   ASL F
Sbjct: 315 FSLRPAAGLLTARDFLASLAF 335


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +1

Query: 346 HLYFLNISIYFCYNFFITSTKLYLFS*SFLRAXVFFFLNTALKF 477
           HL FL    YF   F I +  L  +    +   +++F    + F
Sbjct: 205 HLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILF 248


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 182 VHVIP*C*APCKVAYGWRRPSY 117
           V VIP   AP  V  GW+   +
Sbjct: 291 VRVIPEFDAPAHVGEGWQNTDF 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,045
Number of Sequences: 336
Number of extensions: 1874
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)