Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31755
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 31 0.73
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355... 30 0.96
09_01_0010 - 270146-270568 29 1.7
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 29 2.2
11_04_0009 - 12132781-12133272 29 2.2
01_06_0181 - 27262425-27263337,27263452-27263633 29 2.2
09_02_0411 + 8721855-8722232 29 2.9
03_01_0529 - 3968813-3968983,3969060-3969116,3969215-3969526,396... 29 2.9
06_01_1063 + 8602447-8602974 28 3.9
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464 28 3.9
12_02_0169 + 14835108-14835542 28 5.1
03_06_0244 + 32613914-32614666 28 5.1
11_04_0376 - 16965504-16966101,16966212-16966416,16967175-169681... 27 6.8
07_03_1068 - 23732282-23732409,23733170-23733329,23733432-237335... 27 6.8
10_04_0009 + 7477914-7478411 27 8.9
07_03_1178 - 24580294-24580727,24581749-24582274 27 8.9
07_03_0793 + 21552499-21552729 27 8.9
07_01_0294 + 2130956-2131087,2131495-2131950 27 8.9
05_07_0366 + 29691093-29691590 27 8.9
05_03_0307 + 12027505-12027565,12028300-12028925 27 8.9
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 27 8.9
03_02_1003 - 13127251-13128468 27 8.9
02_01_0760 - 5639315-5639685,5640072-5640360 27 8.9
01_06_1070 - 34286660-34287380,34288020-34288094,34288534-342886... 27 8.9
01_06_0512 + 29942429-29942929 27 8.9
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 200 EEQARGRRSGRRECNSGRRAETAGGGAVRVA 292
+ Q GRRS R C +GR TAG A R+A
Sbjct: 151 DAQTPGRRSRPRRCLAGRPQATAGSPAARLA 181
>06_01_0497 +
3555919-3557154,3557815-3558143,3558177-3558775,
3558919-3560393
Length = 1212
Score = 30.3 bits (65), Expect = 0.96
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 221 RSGRRECNSGRRAETAGGGAVRVAL 295
RS RRE + RR E+ G GAVR AL
Sbjct: 552 RSRRREEETARRGESGGRGAVRCAL 576
>09_01_0010 - 270146-270568
Length = 140
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 197 REEQARGRR-SGRRECNSGRRAETAGGGA 280
R A G+R SG R NSG A AGGGA
Sbjct: 77 RRRPAHGKRHSGGRRRNSGGNATVAGGGA 105
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 39 PQSFLLSRVSQGSSLDAATSRACTTPVRRPSPTVGHFTRSSASGDDV-NLLSFYAKNRLA 215
PQS + S + SS A++S A TP R P G + + +G V N L +A L
Sbjct: 327 PQSVVPSNPAASSSSVASSSPALATPESRDGPGKGGLSTGAIAGIVVGNALFLFAMLSLL 386
Query: 216 AAGLAVENATAGDALKQP 269
A +T G++ +P
Sbjct: 387 VASCCC--STGGESGGEP 402
>11_04_0009 - 12132781-12133272
Length = 163
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 176 REPALVLREEQARGRRSGRRECNSGRRAETAGGG 277
R+ + R Q R R GRR C SG AE+AG G
Sbjct: 117 RDSKIESRPSQRR-RVGGRRGCGSGTCAESAGSG 149
>01_06_0181 - 27262425-27263337,27263452-27263633
Length = 364
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 230 RRECNSGRRAETAGGGAVRVALAPSYL*SRYNAPRLTD 343
RR+C + RR + GGG++ V + SR APR D
Sbjct: 8 RRQCRAPRRLDGGGGGSMDVHPSELLPRSRCTAPRRLD 45
>09_02_0411 + 8721855-8722232
Length = 125
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 197 REEQARGRRSGRRECNSGRRAETAGGGAVR 286
R AR R+ G RE GRR E+ GGG R
Sbjct: 68 RHLAARPRKKGERE-KGGRRRESTGGGGRR 96
>03_01_0529 -
3968813-3968983,3969060-3969116,3969215-3969526,
3969606-3970298,3971473-3971763
Length = 507
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 283 HCAAAGCFSASPAVAFSTARPAAASL 206
H AAA +A P +FS A PAA S+
Sbjct: 8 HAAAAAAAAAGPGKSFSAAAPAAPSV 33
>06_01_1063 + 8602447-8602974
Length = 175
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = +2
Query: 215 GRRSGRRECNSG-----RRAETAGGGAVRV 289
G R RRE +SG R AET GGGA RV
Sbjct: 146 GERERRRELDSGEEEGRREAETDGGGAGRV 175
>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
Length = 504
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 9 VPLRSVAX*HPQSFLLSRVSQGSSLDAATSRACTTPVRRPSPTVGHFTRSSA---SGDDV 179
+PL V P +L S+G+ L R+CT VR P G F + G++
Sbjct: 412 IPLSEVVPGEPTILVLG--SEGTGLRPLVERSCTHLVRIPGNVDGSFVGADTDTDGGEEG 469
Query: 180 NLLSFYAKNRLAAAGLAVENATAGDA 257
+ S + N AAG+ + + +A
Sbjct: 470 DNYSVESLNVSVAAGVLLYHLAGTNA 495
>12_02_0169 + 14835108-14835542
Length = 144
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = +2
Query: 215 GRRSGRRECNSG-----RRAETAGGGAVRV 289
G R RRE SG R AET GGGA RV
Sbjct: 115 GERERRRELESGEEEGRREAETDGGGAGRV 144
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 179 EPALVLREEQARGR-RSGRRECNSGRRAE 262
EPA + +E A R RSGRR +GRR +
Sbjct: 177 EPAAAVAKETAETRLRSGRRRAGAGRRRQ 205
>11_04_0376 -
16965504-16966101,16966212-16966416,16967175-16968197,
16968241-16968892,16969025-16969387,16970095-16970451
Length = 1065
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 152 KELSIRG*REPALVLREEQARGRRSG 229
K L I RE ALVL+E++ARG+ SG
Sbjct: 881 KALQIIQDRELALVLQEKEARGQFSG 906
>07_03_1068 -
23732282-23732409,23733170-23733329,23733432-23733543,
23733924-23734021,23734207-23734615,23734815-23734966,
23735802-23736010,23736708-23736795,23737353-23737673
Length = 558
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 LSIRG*REPALVLREEQARGRRSG-RRECNSGRRAETAGGGAVRVA 292
++ RG EPA LR A G R G R C + +GGG VA
Sbjct: 20 VAARGGAEPARALRLPPANGARRGVRCCCGAANPGGGSGGGGGAVA 65
>10_04_0009 + 7477914-7478411
Length = 165
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 197 REEQARGRRSGRRECNSGRRAETAGGGAV 283
R RGR G R NSG A AGG A+
Sbjct: 83 RRPAHRGRGRGGRRRNSGGNATVAGGDAL 111
>07_03_1178 - 24580294-24580727,24581749-24582274
Length = 319
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 176 REPALVLREEQARGRRSGRRECNSGRRAETAGGG 277
RE + R E R R R NSGR A GGG
Sbjct: 110 REMQSLKRLEAKRKRLERRNSMNSGRSAGAGGGG 143
>07_03_0793 + 21552499-21552729
Length = 76
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 185 ALVLREEQARGRRSGRRECNSGRRAETAGGGAVR 286
A+ R E+AR RR G+R +GGG++R
Sbjct: 4 AVAQRREKARLLDVSRRRQGGGQRVNRSGGGSMR 37
>07_01_0294 + 2130956-2131087,2131495-2131950
Length = 195
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +2
Query: 215 GRRSGRRECNSGRRAETAGGGAVRVAL 295
GRRSGRR SG R GGG V L
Sbjct: 143 GRRSGRRARRSGDR-RGGGGGQVEATL 168
>05_07_0366 + 29691093-29691590
Length = 165
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 197 REEQARGRRSGRRECNSGRRAETAGGGAV 283
R RGR G R NSG A AGG A+
Sbjct: 83 RRPAHRGRGRGGRRRNSGGNATVAGGDAL 111
>05_03_0307 + 12027505-12027565,12028300-12028925
Length = 228
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = +2
Query: 215 GRRSGRRECNSG-----RRAETAGGGAVRV 289
G R RRE +SG R AET GGGA +V
Sbjct: 199 GERERRRELDSGEEEGRREAETDGGGAGKV 228
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 301 RGQSYAHCAAAGCFSASPAVAFSTARPAAASL 206
RGQ+Y H AAA + + A PAAA L
Sbjct: 132 RGQAYYHRAAAAAAAVAAGDATDGEEPAAAEL 163
>03_02_1003 - 13127251-13128468
Length = 405
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 75 SSLDAATSRACTTPVRRPSPTVGHFTRSSAS 167
S L AA+S + T+P RP+P+ F ++A+
Sbjct: 8 SHLTAASSSSTTSPTARPAPSFVSFRAANAA 38
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 27.1 bits (57), Expect = 8.9
Identities = 28/77 (36%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = -3
Query: 274 AAGCFSASPAVAFSTARPAAASLFFA*NESRFTSSPDAELLVKWPTVGEGLLTGVVHARE 95
AAGC A P A S AAA+ N SS A+ T G G H+RE
Sbjct: 13 AAGCALARPLHAASPVAAAAANSHGPLNFRALFSSAGADAAA--TTGGCAPAKGDGHSRE 70
Query: 94 VAA--SSELPWLTRDRR 50
VA S W RD R
Sbjct: 71 VAVVDRSRRRWPWRDLR 87
>01_06_1070 -
34286660-34287380,34288020-34288094,34288534-34288636,
34288866-34289091
Length = 374
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 212 RGRRSGRRECNSGRRAETAGG 274
+GR GRR C G R +TA G
Sbjct: 82 QGRPPGRRRCGRGVRRDTAAG 102
>01_06_0512 + 29942429-29942929
Length = 166
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 316 RSEIGRGQSYAHCAAAGCFSASPAVAFSTARPAAASLFF 200
RS + R Q +A CF +A S AAAS FF
Sbjct: 13 RSGVSRAQVWACAVVVPCFIVGAYLAESYGAAAAASSFF 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,370,114
Number of Sequences: 37544
Number of extensions: 250121
Number of successful extensions: 1033
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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