Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31755
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3204|AAF56037.2|  187|Drosophila melanogaster CG17623-P...    31   1.2  
M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal prot...    29   3.7  
AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA...    29   3.7  
Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.         29   4.9  
AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-P...    29   4.9  

>AE014297-3204|AAF56037.2|  187|Drosophila melanogaster CG17623-PA
           protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -3

Query: 292 SYAHCAAAGCFSASPAVAFSTARPAAASLFFA*NESRFTSSPDAELLVKW--PTVGEGLL 119
           S A      C SAS   +  + RP+A+SL+     S F S   A+L V +    +G G  
Sbjct: 44  SLAVTGPGACASASGGPSPFSKRPSASSLYSTSTSSSFASQMQAQLNVNYGDSALGSGSA 103

Query: 118 TG 113
           TG
Sbjct: 104 TG 105


>M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal protein
           L17A protein.
          Length = 140

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 219 AGLAVENA--TAGDALKQPAAAQCA*LWPRPISD 314
           AG+ V N     G A+  P A +CA LWPR  S+
Sbjct: 102 AGVIVNNKGEMKGSAITGPVAKECADLWPRIASN 135


>AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA
           protein.
          Length = 140

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 219 AGLAVENA--TAGDALKQPAAAQCA*LWPRPISD 314
           AG+ V N     G A+  P A +CA LWPR  S+
Sbjct: 102 AGVIVNNKGEMKGSAITGPVAKECADLWPRIASN 135


>Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 23/84 (27%), Positives = 34/84 (40%)
 Frame = +3

Query: 36  HPQSFLLSRVSQGSSLDAATSRACTTPVRRPSPTVGHFTRSSASGDDVNLLSFYAKNRLA 215
           +PQ+      S  SS+ +A S A  +P   PSP     + S++       L   A    A
Sbjct: 131 YPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTL---APPTTA 187

Query: 216 AAGLAVENATAGDALKQPAAAQCA 287
           AAG    + T+       A+A  A
Sbjct: 188 AAGALAGSPTSSSPSSSAASAAAA 211


>AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-PA
           protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 23/84 (27%), Positives = 34/84 (40%)
 Frame = +3

Query: 36  HPQSFLLSRVSQGSSLDAATSRACTTPVRRPSPTVGHFTRSSASGDDVNLLSFYAKNRLA 215
           +PQ+      S  SS+ +A S A  +P   PSP     + S++       L   A    A
Sbjct: 131 YPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTL---APPTTA 187

Query: 216 AAGLAVENATAGDALKQPAAAQCA 287
           AAG    + T+       A+A  A
Sbjct: 188 AAGALAGSPTSSSPSSSAASAAAA 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,741,132
Number of Sequences: 53049
Number of extensions: 371970
Number of successful extensions: 1253
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)