Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31748
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 32 0.32
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.43
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092) 30 1.3
SB_45853| Best HMM Match : VKG_Carbox (HMM E-Value=8.8e-25) 29 1.7
SB_10658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 29 2.3
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 3.0
SB_55022| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 28 4.0
SB_7222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 28 4.0
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 5.3
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 5.3
SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 27 6.9
SB_20752| Best HMM Match : hATC (HMM E-Value=0.04) 27 6.9
SB_939| Best HMM Match : PH (HMM E-Value=6.9e-14) 27 6.9
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_20937| Best HMM Match : hATC (HMM E-Value=0.04) 27 6.9
SB_35052| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_22424| Best HMM Match : E-MAP-115 (HMM E-Value=5.5) 27 9.2
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 34.7 bits (76), Expect = 0.046
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 241 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGK 384
D +++ K + +LE + DL+ +KRKD+ I+DLN V D + K
Sbjct: 400 DELRKTKKKMQVQYEKLEHQLDDLKVQLKRKDVVIADLNKVVEDYKRK 447
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.9 bits (69), Expect = 0.32
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +1
Query: 238 EDTIKRVCKDYHERIARLE---DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKK 408
ED +++V K +A L+ +EK D E +++ + +++LN+Q+ DL + TL++
Sbjct: 1901 EDELEKVRKKEVSLLATLDTLREEKKDQEQMLQDNGIRLAELNTQIQDLFEE--NKTLEE 1958
Query: 409 VSKYENKFAKLQKKAAEF-NFRNQLKVVKKK 498
K N KL+ A E + + V+K K
Sbjct: 1959 --KVSNDSYKLESAAGEVKSLERERSVLKNK 1987
Score = 31.1 bits (67), Expect = 0.56
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 DAXEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTL 402
D E TIK + ++ + R +DE DL V +K+ E L++Q++DLR + + +
Sbjct: 3021 DIAESTIKNIKQEKN----RFQDEVNDLHGKVSQKNSENELLHAQLDDLRKQITGYQGNI 3076
Query: 403 KKVSKYENKFAKLQKKAAEFNFRNQLK 483
K + + N+ + K + N + K
Sbjct: 3077 KSLEENSNRLQERIKDLEDENLESHKK 3103
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +1
Query: 292 EDEKFD--LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK--YENKFAKLQKKAAE 459
++EKF L ++ RKD I +LN+++ L+G + K T ++++K EN+ K K+ E
Sbjct: 997 QNEKFSETLNSVISRKDKAIDELNAKIRHLQGDYDK-TRRQLNKILVENENLKGSKEDLE 1055
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 238 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 366
ED + R + +RI RLE DL+ + +R SD+N++V
Sbjct: 22 EDLMTRRFRGLEDRIGRLESTVSDLQLLQRRNGRFFSDINTRV 64
>SB_29083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 0.56
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Frame = +1
Query: 217 KNIDDAXEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF-- 387
+ ID E+ I +D + RI + E+ D+E I+ K+ ++ L + L+ +
Sbjct: 30 QEIDQLKEENFILETARDEY-RIKADQLER-DVE-ILNEKNEQLQGLAEESQQLKDEMDV 86
Query: 388 VKPTLKKVSKYENKFAKLQKKAAEF-NFRNQLKVVKKKEFT 507
++ +KVSKYE+ +KK E + R Q+K +++K T
Sbjct: 87 LRHMQEKVSKYESTIDMYKKKLEELSDMRKQMKAMEEKNVT 127
>SB_6360| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0092)
Length = 107
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 265 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 444
D + ++ L + DL+ V D ++ DLN++V+DL K V KV K L
Sbjct: 26 DLNAKVHDLNTKVHDLDTKVHDLDTKVHDLNTKVHDLNTK-VHDLNTKVHDLNTKVHDLN 84
Query: 445 KKAAEFN 465
K + N
Sbjct: 85 TKVHDLN 91
>SB_45853| Best HMM Match : VKG_Carbox (HMM E-Value=8.8e-25)
Length = 854
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/83 (21%), Positives = 41/83 (49%)
Frame = +1
Query: 256 VCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFA 435
VC + R++R +F ++ D+ +D + + +V+P L ++S + +K
Sbjct: 580 VCTGIYVRMSRFPSRRFQQRFVNPNIDILHADWSPFQ---KTTWVQPLLMELSPWRSKLK 636
Query: 436 KLQKKAAEFNFRNQLKVVKKKEF 504
+++KK ++ + N VV +F
Sbjct: 637 EIEKKQSQSSLGNFTDVVFVADF 659
>SB_10658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 409 VSKYENKFAKLQKKAAEFNFR-NQLK 483
V KYEN+ LQ+K EF+F+ N++K
Sbjct: 13 VEKYENEVTVLQEKIKEFDFKTNEIK 38
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 265 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK--KVSKYENKFAK 438
D + ++ L + DL V + ++ DLN++VNDL K K + KV+ K
Sbjct: 348 DLNTKVHDLNTKLHDLNTKVHDLNAKVHDLNTKVNDLNTKNTKVNDQNTKVNDLNTKVHD 407
Query: 439 LQKKAAEFN 465
L K + N
Sbjct: 408 LNAKVHDLN 416
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 265 DYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 444
D + ++ L + DL V + ++ DLN++VNDL K V KV K L
Sbjct: 299 DLNTKLHNLNTKLHDLNTKVHDLNTKLHDLNTKVNDLNTK-VHDFNTKVHDLNTKVHDLN 357
Query: 445 KKAAEFN 465
K + N
Sbjct: 358 TKLHDLN 364
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 250 KRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 429
++ CKD I+R LE ++ I L + +N+L K+SKYE
Sbjct: 372 RKKCKDQGAEISRQSSHIGKLEATKLSQETNIRSLKANINELN--------SKLSKYEGD 423
Query: 430 FAKLQKK 450
+ +L+K+
Sbjct: 424 YEELEKQ 430
>SB_55022| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 441
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 500 SFFFTTFNWLRKLNSAAFFWSLANLFSYLETFFSVGLTN 384
+ FF FN + L SA F WS+ L S T FS +N
Sbjct: 79 ALFFALFNTVLVLISAVFIWSI--LSSSRRTLFSARFSN 115
>SB_7222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 274 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 453
E + R + E DL+ V +I LN + ND+R + + + + +E +K+
Sbjct: 231 EFVKRHKQEILDLQTTVDTLQEQIKHLNDEKNDIRRSYKREMDEMGAGFEG-----EKRR 285
Query: 454 AEFNFRNQL 480
E+ FR ++
Sbjct: 286 LEYRFRREI 294
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 238 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 417
++T+ RV D R L++E+ + + D E+SD+ SQ+ + K V K
Sbjct: 374 QETLTRV--DLENRCQSLQEEQ---NFKKQMYDKELSDIRSQLKTVETKRVVVETDYKDK 428
Query: 418 YENKFA-KLQKKAAEFN 465
YE A KLQ+ +++
Sbjct: 429 YEGLMAEKLQELREDYD 445
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = +1
Query: 241 DTIKRVCKDYHERIARLED-------EKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 399
D ++R D H +I E+ E DL+ +K ++ E ++ N+LRGK K
Sbjct: 1088 DGVRRELIDAHRKIREGEEAREVARKENTDLKRQLKDEEREKDAVSHTANELRGKVKKSE 1147
Query: 400 LKKVSKYENKFAKLQKKAAEFNFRNQLK 483
+K + QK A+ RN L+
Sbjct: 1148 AEKTNLRRQLDEASQKIASLEETRNGLQ 1175
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/96 (19%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 232 AXEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKV 411
A ++ I+ + ++++++DE +L+ R+ EI DL +++N+L + + ++
Sbjct: 1352 ASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLENRINELENMLARISAERD 1411
Query: 412 SKYENKFAKLQKKAAEFN-FRNQLKVVKKKEFTLEE 516
E+ L+ A+ + Q++ + K +L+E
Sbjct: 1412 RALED----LRTSTAKISTLEQQIRDLTKDRNSLDE 1443
>SB_38418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 340 EISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 450
EI +V++L+G+F K + + + + F KLQ K
Sbjct: 112 EIEGFFDEVHELKGQFNKYKMNTIPRLQEVFKKLQSK 148
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 238 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 417
E I+ E+I L +E +L+ +K+KD IS+LN + F +VS
Sbjct: 1048 ESEIEASVASKDEKITILTEEITELKQELKKKDGIISELNDNLT----SFEDEHDSEVSV 1103
Query: 418 YENKFAKLQKKAAE 459
+ K Q++ AE
Sbjct: 1104 FNENLRKQQEQTAE 1117
>SB_20752| Best HMM Match : hATC (HMM E-Value=0.04)
Length = 578
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 128 VRKPPKS*RXSRNVKLLKGGASSRRGAXNLRTLTTPTKILLRGFAKTTMNASLVLKMKNS 307
V K P+ SR K+ +RRG+ N T PTK+ + + L+++ N
Sbjct: 31 VLKAPRDGDLSRERKIAVNQGGNRRGSRNKPTYYEPTKVSAKQRVEEFKGEDLIVR-NNE 89
Query: 308 IWNTSLK 328
++ + K
Sbjct: 90 VYCAACK 96
>SB_939| Best HMM Match : PH (HMM E-Value=6.9e-14)
Length = 1030
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 403 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEE 516
KK+S++E + AK+ + AE RN+ K+ K+ E EE
Sbjct: 136 KKISEFEAQNAKVNQDKAELLERNE-KLSKENELLQEE 172
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 238 EDTIKRVCKDYHERIARLEDE 300
E+ +++V +DY E+IARL++E
Sbjct: 147 EEQLEQVRRDYEEQIARLQEE 167
>SB_20937| Best HMM Match : hATC (HMM E-Value=0.04)
Length = 606
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 128 VRKPPKS*RXSRNVKLLKGGASSRRGAXNLRTLTTPTKILLRGFAKTTMNASLVLKMKNS 307
V K P+ SR K+ +RRG+ N T PTK+ + + L+++ N
Sbjct: 31 VLKAPRDDDLSRKRKIAVNQGGNRRGSRNKPTYYEPTKVSAKQRVEEFKGEDLIVR-NNE 89
Query: 308 IWNTSLK 328
++ + K
Sbjct: 90 VYCAACK 96
>SB_35052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 241 DTIKRVCKDYHERIAR-LEDEKF---DLEYIVKRKDMEISDLNS 360
D I+R + ++R LE+ K +LE V +KDME++DLN+
Sbjct: 6 DKIRRKLESELAEVSRQLEEAKQQIQELEAAVHKKDMELNDLNA 49
>SB_22424| Best HMM Match : E-MAP-115 (HMM E-Value=5.5)
Length = 139
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 VCKDYHERIAR-LE-----DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSK 417
V ++ +ER++R LE DEK ++E I ++D ++ S++ DL+ + K K+ K
Sbjct: 45 VPREEYERLSRQLEVQFVLDEKGEMEVICHKQDDVLTAKESKIKDLKMRLAKQ--KENHK 102
Query: 418 YENKFAKLQKKAAEFNFRNQL-----KVVKKKEFT 507
+ ++Q++ + N L KV +KK T
Sbjct: 103 KQLSDLEIQREQERYIVLNTLAKDENKVKRKKRVT 137
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,752,584
Number of Sequences: 59808
Number of extensions: 195013
Number of successful extensions: 693
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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