Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31745
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g14350.2 68417.m02211 protein kinase family protein contains ...    29   2.5  
At4g14350.1 68417.m02210 protein kinase family protein contains ...    29   2.5  
At3g23310.1 68416.m02940 protein kinase, putative contains prote...    29   2.5  
At3g54420.1 68416.m06019 class IV chitinase (CHIV) almost identi...    28   4.3  
At4g15180.1 68417.m02328 SET domain-containing protein contains ...    27   5.7  
At1g02360.1 68414.m00182 chitinase, putative similar to chitinas...    27   5.7  
At1g70680.1 68414.m08148 caleosin-related family protein similar...    27   7.5  
At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase fa...    27   9.9  

>At4g14350.2 68417.m02211 protein kinase family protein contains
           similarity to Swiss-Prot:O13310 serine/threonine-protein
           kinase orb6 [Schizosaccharomyces pombe]
          Length = 551

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 398 DWFVLYQLGKNIDPLIYKELMTELAEKFEGNDK 496
           +W  LYQ+     P +  EL T+  EKFE  DK
Sbjct: 422 EWGKLYQMKAAFIPQVNDELDTQNFEKFEETDK 454


>At4g14350.1 68417.m02210 protein kinase family protein contains
           similarity to Swiss-Prot:O13310 serine/threonine-protein
           kinase orb6 [Schizosaccharomyces pombe]
          Length = 551

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 398 DWFVLYQLGKNIDPLIYKELMTELAEKFEGNDK 496
           +W  LYQ+     P +  EL T+  EKFE  DK
Sbjct: 422 EWGKLYQMKAAFIPQVNDELDTQNFEKFEETDK 454


>At3g23310.1 68416.m02940 protein kinase, putative contains protein
           kinase domain, Pfam:PF00069
          Length = 568

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 398 DWFVLYQLGKNIDPLIYKELMTELAEKFEGNDK 496
           +W  LYQ+     P +  EL T+  EKFE  DK
Sbjct: 425 EWEKLYQMKAAFIPQVNDELDTQNFEKFEETDK 457


>At3g54420.1 68416.m06019 class IV chitinase (CHIV) almost identical
           to class IV chitinase from GI:2597826 [Arabidopsis
           thaliana]
          Length = 273

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +2

Query: 149 YGPSGTVQKFDGLCVLPLNIVNEKIYVF---LWXW 244
           YGP+GT   FDGL   P  +  + +  F   LW W
Sbjct: 183 YGPAGTAIGFDGLNA-PETVATDPVISFKTALWYW 216


>At4g15180.1 68417.m02328 SET domain-containing protein contains Pfam
            profile PF00856: SET domain
          Length = 2326

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 383  KLQIGDWFVLYQLGKNIDPLIYKELMTELAEK 478
            +L IGDWF     G+   PL + EL  +L EK
Sbjct: 977  QLHIGDWFYTDGAGQEQGPLSFSELQ-KLVEK 1007


>At1g02360.1 68414.m00182 chitinase, putative similar to chitinase
           precursor GI:5880845 from [Petroselinum crispum]
          Length = 272

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +2

Query: 143 HKYGPSGTVQKFDGLCVLPLNIVNEKIYVF---LWXW 244
           + YGP+G    FDGL   P  + N  +  F   LW W
Sbjct: 152 YNYGPAGRALGFDGL-RNPETVSNNSVIAFQTALWFW 187


>At1g70680.1 68414.m08148 caleosin-related family protein similar to
           Ca+2-binding EF hand protein GB:AAB71227 [Glycine max];
           contains Pfam profilePF05042: Caleosin related protein
          Length = 192

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 386 LQIGDWFVLYQLGKNIDPLIYKELM 460
           L  G+W VLY L K+   L++KE++
Sbjct: 147 LAFGEWKVLYNLCKDKSGLLHKEIV 171


>At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase
           family protein belongs to Pfam:PF03372:
           Endonuclease/Exonuclease/phosphatase family; contains 4
           WD-40 repeats (PF00400);similar to SP:Q01968 Inositol
           polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's
           oculocerebrorenal syndrome protein) (SP:Q01968) [Homo
           sapiens]
          Length = 1144

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 27  DGEFSTYGSDVVXFTENGARGN 92
           DGEFST G  +V    +G RGN
Sbjct: 68  DGEFSTEGVAIVDGRTSGERGN 89


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,979,197
Number of Sequences: 28952
Number of extensions: 208618
Number of successful extensions: 501
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)