Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31734
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   2.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   2.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   2.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   2.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   4.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   4.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   4.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 159 HDDLR-MYQDSYSSVRFVQSVPAEPQPRGTRRTEPPYPPLPVM 34
           + +LR ++QDS   + F  ++  +   R    T   YPP+P++
Sbjct: 23  YQELRDIFQDSDRPITFNDTLQMKYLERVLLETLRMYPPVPII 65


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
          transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 70 PN*ASVPTPTGDGHYRPPWGY 8
          PN   +P    + HY  P+GY
Sbjct: 30 PNAQQMPPHYSNYHYEDPYGY 50


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
          protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 70 PN*ASVPTPTGDGHYRPPWGY 8
          PN   +P    + HY  P+GY
Sbjct: 30 PNAQQMPPHYSNYHYEDPYGY 50


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
          protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 70 PN*ASVPTPTGDGHYRPPWGY 8
          PN   +P    + HY  P+GY
Sbjct: 30 PNAQQMPPHYSNYHYEDPYGY 50


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 117 VRWSRSPDTSSSRHDWRSHRL 179
           V+  R PD  S R  W+S R+
Sbjct: 35  VQGVRGPDFRSLRFSWKSARV 55


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 117 VRWSRSPDTSSSRHDWRSHRL 179
           V+  R PD  S R  W+S R+
Sbjct: 35  VQGVRGPDFRSLRFSWKSARV 55


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 156 HDWRSHRLQVRPGQFESKSR 215
           H    HR+Q++P    S SR
Sbjct: 13  HHLEPHRMQIKPQSPSSSSR 32


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 156 HDWRSHRLQVRPGQFESKSR 215
           H    HR+Q++P    S SR
Sbjct: 13  HHLEPHRMQIKPQSPSSSSR 32


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 249 LDHQVRLVEEIIIHEDFNTKSLKNDVAL 332
           L H + L  + ++H  FN    K+ +A+
Sbjct: 622 LKHALDLDRQGLLHRQFNLPPAKDTIAV 649


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,169
Number of Sequences: 336
Number of extensions: 2634
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)