Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31734
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    29   0.028
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   1.9  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   5.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   10.0 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   10.0 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   10.0 

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
 Frame = +3

Query: 270 VEEIIIHEDFNTKSLK----NDVALLRMHAPFNLAEHINMICLPDPG--DXFDTSKNCVA 431
           + ++IIH  ++         ND+ALL+        + +   CLP     D F  S   V 
Sbjct: 236 INKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVTVL 295

Query: 432 NGWGKDVFGLQGRYAVILKKIEIDMV 509
            GWG   F   G  + IL+K  ++M+
Sbjct: 296 -GWGHTSF--NGMLSHILQKTTLNML 318


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 105 SVPAEPQPRGTRRTEPPYPPLP 40
           S P   +  GT+ TE   PPLP
Sbjct: 620 SPPVTTKRDGTQETEERLPPLP 641


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 398 PRVREADHVDVLG 360
           P V E+D VDV+G
Sbjct: 200 PSVSESDEVDVIG 212


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -1

Query: 135 DSYSSVRFVQSVPAEPQPRGTRRTEPPYPPLPVM 34
           D Y +     +  AE    GT +  P Y P+ V+
Sbjct: 528 DDYWNCVIQYNTRAENHQTGTAKMGPSYDPMAVV 561


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 105 SVPAEPQPRGTRRTEPPYPP 46
           S P  P PR  R  EP   P
Sbjct: 106 SQPRPPHPRLRREAEPEAEP 125



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 105 SVPAEPQPRGTRRTEPPYPP 46
           S P  P PR  R  EP   P
Sbjct: 162 SQPRPPHPRLRREAEPEAEP 181


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = -1

Query: 108 QSVPAEPQPRGTRRTEPPYPPLPVMVTTDPHGVTY 4
           Q VP         + + PYP  P     D    TY
Sbjct: 59  QGVPGHHYGAAGSQQDMPYPRFPPYNRMDMRNATY 93


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 347 RVHPQERHVVLEAFRVEIFVYDYFLDESHLVVQH 246
           +VHP   H V +    E+   DY     HL  +H
Sbjct: 273 KVHPLYGHGVCKWPGCEVICEDYQAFLKHLNTEH 306


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,325
Number of Sequences: 438
Number of extensions: 3298
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)