Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31733
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17989| Best HMM Match : PAN (HMM E-Value=0.00015) 29 1.7
SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) 29 2.3
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_4891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 29 3.0
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 4.0
SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 28 5.3
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 28 5.3
SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 28 5.3
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 28 5.3
SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) 28 5.3
SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) 28 5.3
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_17015| Best HMM Match : 7tm_1 (HMM E-Value=0.00027) 27 6.9
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 27 6.9
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_32151| Best HMM Match : MFMR (HMM E-Value=0.92) 27 9.2
SB_30016| Best HMM Match : Strabismus (HMM E-Value=0) 27 9.2
>SB_17989| Best HMM Match : PAN (HMM E-Value=0.00015)
Length = 99
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +3
Query: 75 CRPSPV*K*ILQE---EPIPVQHI----PAVRSRDHSYSVSAHPDLLYCPRQSSTQ 221
C PS + + L+ + PV+H+ +SRD YS++ H D L C +ST+
Sbjct: 22 CHPSSIDRHQLKGHLLDSFPVEHMHFCFERCKSRDKCYSINFHKDSLVCELNNSTK 77
>SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3)
Length = 336
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAIPTSPPVPEQ 507
SF+ S EG P + E+ Q G IPTSPPV E+
Sbjct: 67 SFASVSEEGSPAKKIHFERED--QDPGDQIPTSPPVAER 103
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 389 AHSPGHLLKVFPSASITSPTRTDTSPLV-MLSPLPHQCLS 505
A+ P H V SA+ SP+ TDTS +V +S PH ++
Sbjct: 2226 ANIPLHSSSVTSSAAFCSPSNTDTSRVVGRVSQAPHNSIT 2265
>SB_4891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +3
Query: 114 EPIPVQHI----PAVRSRDHSYSVSAHPDLLYCPRQSSTQ 221
+ PV+H+ +SRD YS++ H D L C +ST+
Sbjct: 42 DSFPVEHMHFCFERCKSRDKCYSINFHKDSLVCELNNSTK 81
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581
Query: 454 GYQ-PTGXAIPT 486
GYQ PT +PT
Sbjct: 582 GYQKPTTNQLPT 593
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 448 ENGYQPTGXAIPTSPPVPEQ 507
EN YQP P SPP P+Q
Sbjct: 117 ENSYQPVELFAPNSPPKPQQ 136
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 355 GNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
G PA P + S+S TSP P S +Y Y PT + PTSP
Sbjct: 448 GYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 496
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 469 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 503
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 476 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 510
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 483 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 517
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 490 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 524
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 497 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 531
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 504 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 538
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 511 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 545
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 518 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 552
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 525 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 559
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 532 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 566
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 539 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 573
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 391 SFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
S+S TSP P S +Y Y PT + PTSP
Sbjct: 546 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 580
>SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 371 FPSLHRAHSPGHLLKVFPSASITSPT--RTDTSPLVMLSPLPHQCLSR 508
F L +AH+P H+L VFP+ T + + P V++ +C +R
Sbjct: 3 FLYLSQAHTPPHILLVFPAKKCNRGTLSKNWSGPTVLIELAKGKCQTR 50
>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
Length = 264
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 346
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 249 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 308
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 309 GYQQPTTNQLPT 320
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 546 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 605
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 606 GYQQPTTNQLPT 617
>SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4)
Length = 335
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 453
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 232 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 291
Query: 454 GY-QPTGXAIPT 486
GY QPT +PT
Sbjct: 292 GYQQPTTNQLPT 303
>SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1)
Length = 644
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 352 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 459
G P +PV + + W G PIS+N N Y
Sbjct: 146 GSLPDYIPVYSPETIVWGQSSGAPISINSSVIVNAY 181
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 370 VPVVAQGSFSWTSPEGVPISVNYVADENGY 459
+PV + G+ W G PIS+N N Y
Sbjct: 171 IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200
>SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 355 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGXAIPTSPP 495
GNPP PV +F + P + Y A + P G ++P PP
Sbjct: 105 GNPPYPPVDQYSAFPY--PPQDQQAPPYPAQNQYWNPQGTSLPPPPP 149
>SB_17015| Best HMM Match : 7tm_1 (HMM E-Value=0.00027)
Length = 251
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -1
Query: 138 VCAVPVWVLLVEFIFIPDLGGNRCHHASEYYCEFHFCYSSKTSYV 4
+C P W+ ++ +F+P G R S Y F F + S +
Sbjct: 154 LCWCPSWIWVITCLFVPSPHGKRAICTSTQYHIFRFIAAYSNSAI 198
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 382 AQGSFSWTSPEGVPISVNYVADENGYQPTGXAI-PTSP 492
A S+S TSP P S +Y + Y P + PTSP
Sbjct: 685 ASPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSP 722
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 198 NRGDRDGQKRSRSGHGNERP 139
++G +DGQKR+ SG G++ P
Sbjct: 273 DKGMKDGQKRTFSGEGDQDP 292
>SB_32151| Best HMM Match : MFMR (HMM E-Value=0.92)
Length = 243
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 259 GNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSF--SWTSPEGVPISV 432
G I +G Y + +GIA Q + P + + + + ++T P G+ +
Sbjct: 51 GIAIQSNGPYVSTFTQPSGIAMQSNDPYVSTFTQPSGIAMQSNDPYVSAFTQPSGIAMQS 110
Query: 433 NYVADENGYQPTGXAIPTSPP 495
N QP+G A+ ++ P
Sbjct: 111 NEPYVSTFTQPSGIAMQSNDP 131
>SB_30016| Best HMM Match : Strabismus (HMM E-Value=0)
Length = 543
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 354 WKPPCCSRRCTGLIL 398
WKPP C C GL L
Sbjct: 115 WKPPMCGIECDGLFL 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,138,273
Number of Sequences: 59808
Number of extensions: 363113
Number of successful extensions: 1090
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -