Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31728
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 299 VVYNTFLFLPLSFRSLIHSF 358
           V YN F F+PL   +L H F
Sbjct: 183 VSYNLFSFVPLVVNALDHLF 202


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 299 VVYNTFLFLPLSFRSLIHSF 358
           V YN F F+PL   +L H F
Sbjct: 139 VSYNLFSFVPLVVNALDHLF 158


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 309 LYTTRLCMRLSRLRTSHLTVFFHGFFLTVLL 217
           L T   C RL   +   + + FH     VLL
Sbjct: 27  LQTVGKCQRLKTDKNCTIVIIFHLILFAVLL 57


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 281 SRIHKRVVYNTFLFLPLSFRSLIHSFSILRNLLF 382
           S I   + YN  + L L F +L H+F  + N +F
Sbjct: 200 SHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVF 233


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 281 SRIHKRVVYNTFLFLPLSFRSLIHSFSILRNLLF 382
           S I   + YN  + L L F +L H+F  + N +F
Sbjct: 200 SHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVF 233


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 281 SRIHKRVVYNTFLFLPLSFRSLIHSFSILRNLLF 382
           S I   + YN  + L L F +L H+F  + N +F
Sbjct: 200 SHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVF 233


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 209 FFSSVAQQNPYPLQACRKELRSK 141
           F+S ++  NPYP +  ++EL  K
Sbjct: 249 FYSHLS--NPYPSEEAKEELARK 269


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 50  Y*RNTAIYQ*PFSKFNETNVVQYTNKQVLYFWNE 151
           Y RNT +     ++ +      Y N Q  Y++N+
Sbjct: 330 YVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNK 363


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 50  Y*RNTAIYQ*PFSKFNETNVVQYTNKQVLYFWNE 151
           Y RNT +     ++ +      Y N Q  Y++N+
Sbjct: 278 YVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNK 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,514
Number of Sequences: 336
Number of extensions: 1949
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)