Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31728
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    22   4.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.5  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   7.5  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   10.0 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   10.0 

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -2

Query: 215 HIFFSSVAQQNPYPLQACRKELRSKNTIPAYLYT 114
           H+      +Q  Y    C +   S+N++  ++YT
Sbjct: 24  HVADKHAERQEEYRCVICERVYCSRNSLMTHIYT 57


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 16  WPT*LEPXIYCLLTK 60
           WP  LEP   C LT+
Sbjct: 178 WPEELEPGTPCQLTR 192


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 16  WPT*LEPXIYCLLTK 60
           WP  LEP   C LT+
Sbjct: 178 WPEELEPGTPCQLTR 192


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 209 FFSSVAQQNPYPLQACRKELRSKN 138
           FF S+ Q +PY L A   E+ + N
Sbjct: 67  FFDSLWQPDPYFLNAKVSEIAALN 90


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 246 FHGFFLTVLLSHFFQFGRA 190
           +H FF+ V+   F  FG A
Sbjct: 5   YHFFFILVITLIFLYFGEA 23


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 143 WNEVPYGRLGGDRDFAARPN*KKCDSKTVRKN 238
           +N   YG     RD+ +RP  K+  S+   +N
Sbjct: 86  YNNHLYGSTPDSRDYFSRPFEKRLHSRLPGRN 117


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 16  WPT*LEPXIYCLLTK 60
           WP  LEP   C LT+
Sbjct: 178 WPEELEPGTPCQLTR 192


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 117 IQISRYCIFGTKFLTA 164
           +++ RYC+FG    TA
Sbjct: 533 LKMPRYCLFGDSVNTA 548


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 116 YTNKQVLYFWN 148
           YT + V+Y WN
Sbjct: 153 YTKRDVIYKWN 163


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 83  FSKFNETNVVQYTNKQ 130
           +  FN+TNV QY   Q
Sbjct: 376 YPTFNQTNVDQYLYNQ 391


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,306
Number of Sequences: 438
Number of extensions: 1920
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)