Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31726
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   234   8e-61
UniRef50_UPI00004D976B Cluster: UPI00004D976B related cluster; n...    35   0.96 
UniRef50_Q0E8G5 Cluster: CG32043-PA, isoform A; n=4; Sophophora|...    33   3.9  
UniRef50_A5K9A5 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    32   8.9  
UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;...    32   8.9  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  234 bits (573), Expect = 8e-61
 Identities = 117/171 (68%), Positives = 117/171 (68%)
 Frame = +3

Query: 3   LTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 182
           LTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN
Sbjct: 11  LTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 70

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXXXXXXXXXXXX 362
                                        KEDLSKYLGDAYKGSSI              
Sbjct: 71  GDRGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLPVVKPTIPVPV 130

Query: 363 XXXXXASKVVTPTYVASKVVPPSGAGXDYKYGXXRYDNDVXXEGYHYLXET 515
                ASKVVTPTYVASKVVPPSGAG DYKYG  RYDNDV  EGYHYL ET
Sbjct: 131 TPTYVASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYET 181


>UniRef50_UPI00004D976B Cluster: UPI00004D976B related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004D976B UniRef100 entry -
           Xenopus tropicalis
          Length = 205

 Score = 35.1 bits (77), Expect = 0.96
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +1

Query: 361 SHPHTLPARWSHPHTLPARWSHP 429
           SHP+ LPA +SHP+ L A +SHP
Sbjct: 88  SHPNPLPAPYSHPNPLLAPYSHP 110



 Score = 35.1 bits (77), Expect = 0.96
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +1

Query: 361 SHPHTLPARWSHPHTLPARWSHP 429
           SHP+ L A +SHP+ LPA +SHP
Sbjct: 128 SHPNPLLAPYSHPNPLPAPYSHP 150



 Score = 34.3 bits (75), Expect = 1.7
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 361 SHPHTLPARWSHPHTLPARWSHP 429
           SHP+ LPA +SHP+ + A +SHP
Sbjct: 58  SHPNPLPAPYSHPNPILAPYSHP 80



 Score = 33.1 bits (72), Expect = 3.9
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 361 SHPHTLPARWSHPHTLPARWSHP 429
           SHP+ L   +SHP+ LPA +SHP
Sbjct: 48  SHPNPLLEPYSHPNPLPAPYSHP 70



 Score = 32.3 bits (70), Expect = 6.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 361 SHPHTLPARWSHPHTLPARWSHP 429
           SHP+ +   +SHP+ LPA +SHP
Sbjct: 78  SHPNPILEPYSHPNPLPAPYSHP 100


>UniRef50_Q0E8G5 Cluster: CG32043-PA, isoform A; n=4;
           Sophophora|Rep: CG32043-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 783

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 364 HPHTLP---ARWSHPHTLPARWSHPAXPAXTTNT 456
           HPHT P   A+ SHPHTLP    H   P   T +
Sbjct: 641 HPHTHPHPHAQHSHPHTLPHSLPHHLQPGTPTRS 674


>UniRef50_A5K9A5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 523

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 446 VXAGXAGWDHLAGNVCGCDHLAGNVCGCDWHGNGR 342
           V     G +H+ GN  G +H++GN  G + HG G+
Sbjct: 331 VSGNHVGGNHIGGNHVGSNHVSGNHIGGNHHGGGQ 365


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 141 NSGRYIPDNSGAYN 182
           N GRY PDNSGAYN
Sbjct: 25  NDGRYYPDNSGAYN 38


>UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 645

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 414 CWQRMWV*PPCWQRMWV*LAREW*ASRRAGEQCW 313
           CWQR+ V   CWQR+ V +   W  +   GE CW
Sbjct: 78  CWQRVGVEEECWQRV-VAVEESWQRAGVVGE-CW 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,760,442
Number of Sequences: 1657284
Number of extensions: 6615358
Number of successful extensions: 21226
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21124
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)