Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31724
         (326 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    32   2.8  
UniRef50_A3J2R1 Cluster: Putative uncharacterized protein; n=1; ...    31   3.7  
UniRef50_A4L213 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 279 RGGARXPIRPIVSRXT 326
           RGGAR PIRPIVSR T
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_A3J2R1 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BAL38|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BAL38
          Length = 130

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 150 FNAIPIFKYSLINIILVSLIYKNKFKKXHPFYL 52
           FN +  F +SL+N+I +S +Y N+  K   ++L
Sbjct: 9   FNTLFFFTFSLLNVIAISSVYLNRVVKPSLYFL 41


>UniRef50_A4L213 Cluster: Putative uncharacterized protein; n=1;
           Gryllus bimaculatus nudivirus|Rep: Putative
           uncharacterized protein - Gryllus bimaculatus nudivirus
          Length = 199

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 226 KPIIKSLTRLIINNNLFVIIHNIITF*CDSNI*IFLNQYNI 104
           KP+I S+T L  N+NL V + N I     S++  F+N Y +
Sbjct: 151 KPVIYSITDLFYNSNLCVYLSNQI---LKSDVNFFINSYKL 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,070,692
Number of Sequences: 1657284
Number of extensions: 2936876
Number of successful extensions: 5852
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5850
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)