Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31724
(326 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.68
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 26 8.3
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 26 8.3
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 26 8.3
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_44412| Best HMM Match : DUF1070 (HMM E-Value=0.76) 26 8.3
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 26 8.3
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 26 8.3
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 26 8.3
>SB_17787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 0.68
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2
Query: 220 IIKSLTRLIINNNLFVIIHNIITF*CDSNI*IFLNQYNISFV 95
II ++ +IINN + +II+NII ++ I I +N I+ +
Sbjct: 51 IINNIIIIIINNIIIIIINNIIIIIINNIIIIIINNIIINII 92
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 199 LIINNNLFVIIHNIITF*CDSNI*IFLNQYNISFVD 92
+IINN + +II+NII ++ I I +N I ++
Sbjct: 50 IIINNIIIIIINNIIIIIINNIIIIIINNIIIIIIN 85
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 15 CNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 71 CNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 639 CNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 50 CNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 12 CNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 52 CNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 1890 CNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 50 CNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 12 CNTTHYRANW 21
>SB_44412| Best HMM Match : DUF1070 (HMM E-Value=0.76)
Length = 632
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 153 VIILCIITKRLLLIINLVNDFIIGLRCFV*LAV*IXXXXXXTRGGARXPIR 305
+II+ II +++IIN++N II + V A + G PIR
Sbjct: 3 IIIILIIVIIIIIIINIINIIIIIVVVVVVFAAVVVTVSDAHNGTISGPIR 53
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 44 CNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 93 CNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 71 CNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 82 CNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 58 CNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 326 CXTTHYRXNW 297
C TTHYR NW
Sbjct: 82 CNTTHYRANW 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,517,661
Number of Sequences: 59808
Number of extensions: 80528
Number of successful extensions: 174
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 450550116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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