Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31722
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45220.1 68416.m04880 serpin, putative / serine protease inhi...    32   0.26 
At4g28620.1 68417.m04092 ABC transporter family protein identica...    29   2.5  
At1g06520.1 68414.m00691 phospholipid/glycerol acyltransferase f...    29   2.5  
At5g45470.1 68418.m05586 expressed protein contains Pfam domain,...    27   5.7  
At4g31770.1 68417.m04508 calcineurin-like phosphoesterase family...    27   9.9  

>At3g45220.1 68416.m04880 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 393

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 279 IDDXENIAFSPLGYSAILAILAEGAKGETXEQLYNALHLPQDPAL 413
           + +  N+ FSP+  + +L ++A G+   T EQ+ + + LP    L
Sbjct: 25  VANGSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYL 69


>At4g28620.1 68417.m04092 ABC transporter family protein identical
           to half-molecule ABC transporter ATM2 GI:9964119 from
           [Arabidopsis thaliana]
          Length = 680

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = -2

Query: 515 IFVNIXEVLELRLIVCVSVYIFXSLHDVLVCFSCQSWV 402
           +F  +  +LE+ ++ C+  Y F +++ ++ C S  S++
Sbjct: 234 VFNIMPTILEISMVSCILAYKFGAVYALITCLSVGSYI 271


>At1g06520.1 68414.m00691 phospholipid/glycerol acyltransferase
           family protein contains Pfam profile PF01553:
           Acyltransferase
          Length = 585

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 169 PLSXHDGFARDVPTNPETPALLEMLPVNYLQLYYRVTL 282
           PL  HDG    +PT   T A+   LP+ +L   +R+++
Sbjct: 321 PLIFHDGRLAFLPTPLATLAMFIWLPIGFLLAVFRISV 358


>At5g45470.1 68418.m05586 expressed protein contains Pfam domain,
           PF04578: Protein of unknown function, DUF594
          Length = 866

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +3

Query: 360 ETXEQLYNALHLPQDPALTRKTYQYIMERLKNVNTYAYNQPE 485
           +T + ++  L +  +P +TR+ +++I E LKN + Y  + PE
Sbjct: 585 DTLDMVHKTLFVHGEP-MTRELWKFIFEELKNKSKYG-DSPE 624


>At4g31770.1 68417.m04508 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 418

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +1

Query: 199 DVPTNPETPALLEMLPVNYL 258
           ++P NP+T +LLE+L + YL
Sbjct: 345 EIPQNPQTLSLLELLGLPYL 364


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,549,385
Number of Sequences: 28952
Number of extensions: 197059
Number of successful extensions: 409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)