Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31720
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81109-9|CAB54295.1|  226|Caenorhabditis elegans Hypothetical pr...    30   0.85 
Z81109-8|CAB54296.1|  270|Caenorhabditis elegans Hypothetical pr...    30   0.85 
Z81109-7|CAB03248.1|  268|Caenorhabditis elegans Hypothetical pr...    30   0.85 

>Z81109-9|CAB54295.1|  226|Caenorhabditis elegans Hypothetical
           protein R10D12.13c protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 376 DYFSEKXMMGRNPLLYEQLXGQSLTDEEIKERDRXT 483
           ++FS+  M  R P L++ + G+ L DEE  +  R T
Sbjct: 31  EFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPT 66


>Z81109-8|CAB54296.1|  270|Caenorhabditis elegans Hypothetical
           protein R10D12.13b protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 376 DYFSEKXMMGRNPLLYEQLXGQSLTDEEIKERDRXT 483
           ++FS+  M  R P L++ + G+ L DEE  +  R T
Sbjct: 75  EFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPT 110


>Z81109-7|CAB03248.1|  268|Caenorhabditis elegans Hypothetical
           protein R10D12.13a protein.
          Length = 268

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 376 DYFSEKXMMGRNPLLYEQLXGQSLTDEEIKERDRXT 483
           ++FS+  M  R P L++ + G+ L DEE  +  R T
Sbjct: 73  EFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPT 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,982,844
Number of Sequences: 27780
Number of extensions: 119006
Number of successful extensions: 194
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)