Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31718
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 35 0.001
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 34 0.002
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 32 0.010
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 31 0.017
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 30 0.053
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 25 1.5
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 2.0
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 24 3.5
AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related ... 24 3.5
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 23 4.6
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 23 4.6
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 6.1
Y09953-1|CAA71084.1| 91|Anopheles gambiae histone H4 protein. 23 8.1
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 35.1 bits (77), Expect = 0.001
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 1/130 (0%)
Frame = +1
Query: 13 KVSLTTQ-LEDTKRLADEEARERATLLGKFRNLEHDLDNIREQVEEEAEGKADLQRQLSK 189
K + T Q L K +E +R L N+E + N R+ ++ E R
Sbjct: 1376 KANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQIVNSRDLLQRAEEALYAASRNAED 1435
Query: 190 ANAEAQLWRSKYESEGVARSEELEEAXRKLQARLAEAEETIESLNQKVXALEKTXQRLXT 369
A AQ + KY E +E +++ + + + LN + L KT RL
Sbjct: 1436 ARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGR---LAKTDNRL-- 1490
Query: 370 EVEDLQLEVD 399
E + Q+ D
Sbjct: 1491 EEREAQIRKD 1500
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 34.3 bits (75), Expect = 0.002
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 115 DLDNIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESEGVARSEELEEAXRKLQARLA 294
+++ I+ ++E+ D+ ++SK A + E + E R Q
Sbjct: 678 EINRIQAMLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTSFQ 737
Query: 295 EAEETIESLNQKVXALEKT 351
+ +E IE LN+K+ L+KT
Sbjct: 738 QTKEEIEELNKKIETLQKT 756
Score = 26.2 bits (55), Expect = 0.66
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +1
Query: 28 TQLEDTKRLADEEARERATLLGKFRNLEHDLDNIR-EQVEEEAEGKADLQRQLSKANAEA 204
+++E T + + L + NL+ L +Q +EE E L K EA
Sbjct: 701 SKIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEA 760
Query: 205 QLWRSKYESEGVARSEELEEAXRKLQARLAEAEETIESLNQKVXALEKTXQRLXTEVEDL 384
+ +++ ++ ++ + + L AEE ++ +K K ++ + E L
Sbjct: 761 RETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETL 820
Query: 385 QLEVD 399
+LE++
Sbjct: 821 KLEIE 825
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 32.3 bits (70), Expect = 0.010
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 106 LEHDLDNIREQVEEEAEGKADLQRQLSK-ANAEAQLWRSKYE-SEGVARSEELEEAXRKL 279
+E+ + ++E+ E E K DLQ QLSK + ++ R + + E AR ++E K
Sbjct: 638 IENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKF 697
Query: 280 QARLAE-AEETIESLNQKVXALEK 348
+ E+ ++ +KV ALE+
Sbjct: 698 ERSCRTIIEQLLDQQRRKVAALER 721
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 31.5 bits (68), Expect = 0.017
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 34 LEDTKRLADEEARERATLLGKFRNLEHDLDNIREQVEEEAEGKADLQRQLSK 189
LE+ KR+ E +++ T + L+ +LDN+REQ+ + K + R+ K
Sbjct: 459 LEEQKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDKHEDARRKKK 510
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 29.9 bits (64), Expect = 0.053
Identities = 27/91 (29%), Positives = 38/91 (41%)
Frame = +1
Query: 49 RLADEEARERATLLGKFRNLEHDLDNIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYE 228
RL +EE A R E +L RE+ + E E + QR+ K E Q R K +
Sbjct: 451 RLREEERAREAREAAIEREKERELREQREREQREKEQREKEQRE--KEERERQ-QREKEQ 507
Query: 229 SEGVARSEELEEAXRKLQARLAEAEETIESL 321
E R +E E + + R E E E +
Sbjct: 508 REREQREKEREREAARERERERERERERERM 538
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 25.0 bits (52), Expect = 1.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 191 PTPRLNCGAPSTSPRASLAPRNSKRPSASSR 283
P PR N + ++ P +L PR + SSR
Sbjct: 643 PPPRTNSQSQASEPTPALPPRADRDSKPSSR 673
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 24.6 bits (51), Expect = 2.0
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +1
Query: 49 RLADEEARERATLL----GKFRNLEHDLDNIREQVEEEAEGKADLQRQLSKANAEAQLWR 216
R+ DE E LL GK + L I ++++ E K +L A L
Sbjct: 166 RVYDERKEESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEY 225
Query: 217 SKYESEGVARSEELEE 264
YE+E ++LEE
Sbjct: 226 VIYETELKETRKQLEE 241
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 23.8 bits (49), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 182 CPRPTPRLNCGAPSTS 229
CPR P + C PS+S
Sbjct: 30 CPRGGPHVGCNPPSSS 45
>AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related 1
protein protein.
Length = 178
Score = 23.8 bits (49), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 182 CPRPTPRLNCGAPSTS 229
CPR P + C PS+S
Sbjct: 30 CPRGGPHVGCNPPSSS 45
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 23.4 bits (48), Expect = 4.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 133 EQVEEEAEGKADLQRQLSKANAEAQLWRSKYESEGVARSEELEEAXRKL 279
E +EEE E +A+ + + + + S E +EELEE ++L
Sbjct: 78 EHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 23.4 bits (48), Expect = 4.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 215 APSTSPRASLAPRNSKRPSASSR 283
APS++ +S P + PSASS+
Sbjct: 665 APSSNQSSSSTPNAEQSPSASSK 687
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.0 bits (47), Expect = 6.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 361 DAXWSSRERQPSG*GIRLSPRLRRDEPGAC 272
D+ SSR P+G G LR D P C
Sbjct: 26 DSAESSRYYHPAGAGSEPGSNLRYDAPDDC 55
>Y09953-1|CAA71084.1| 91|Anopheles gambiae histone H4 protein.
Length = 91
Score = 22.6 bits (46), Expect = 8.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 12 QGVAHYTARRHQEARRRGSQGTCYPS 89
+G+ ARRH++ R QGT P+
Sbjct: 9 KGLGKGGARRHRKVLRDNIQGTTKPA 34
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.306 0.124 0.315
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,782
Number of Sequences: 2352
Number of extensions: 5903
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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