Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31714
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.014
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   1.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   2.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 0.014
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = -3

Query: 394 SVHHLFFTKIISFYLHFL*CLISSVPYPLASACFRMIVTQIVHVIPKCLIFGARDIFKV- 218
           +VH LF+   I F +HFL C      Y    A   +I+  + +     +IF    +F + 
Sbjct: 80  TVHLLFYCPFIIFTVHFLLC-----TYYFYYAF--IILLCVYYFYYAFIIFTVHLLFLLC 132

Query: 217 FYVIRS*IFSELHEKFYR*SFINFKGHLQFLTCPYRLF 104
            Y     +F  L   ++  +FI F  HL FL C Y  F
Sbjct: 133 IYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFF 170


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 410 EQLVGQYLTDEEIKERDRITENVSFLNLILE 502
           E  V Q +  +EI + DR+T+N  +L+ ILE
Sbjct: 20  EYTVPQNIDIDEILKNDRLTKN--YLDCILE 48


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 154 INFKGHLQFLTCPYRLFISMGILKGYICTSY*VVN 50
           ++F  +L F+    +LF SM I+KG + T+Y +++
Sbjct: 168 VSFATNLYFIII--QLFGSMKIVKGTLKTAYYLIS 200


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 237 LEIFSKYFM*LGAKYFPNCMR 175
           L IF  YF+   A Y  NC+R
Sbjct: 327 LAIFILYFICDEAHYASNCLR 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,168
Number of Sequences: 336
Number of extensions: 2250
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)