Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31714
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011577-1|AAH11577.1|  343|Homo sapiens coiled-coil domain cont...    62   1e-09
BC007575-1|AAH07575.1|  173|Homo sapiens CCDC97 protein protein.       49   8e-06

>BC011577-1|AAH11577.1|  343|Homo sapiens coiled-coil domain
           containing 97 protein.
          Length = 343

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 37/142 (26%), Positives = 63/142 (44%)
 Frame = +2

Query: 32  NPVTDIIDYLVRSANISFKNSHANEQPVRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNH 211
           N     + + V ++ +   +    E  +   EK+ +  ++Y   P+ FL +F   L   H
Sbjct: 60  NAAVSAMLHAVAASRLPVCSQQQGEPDLTEHEKVAILAQLYHEKPLVFLERFRTGLREEH 119

Query: 212 IKYFENISSSKDQTFRNYVHYLSDYHSETSXXXXXXXXXYKALQKMKIKTDYFSEKQMMY 391
           +  F ++       F              +         Y AL+++    +YFS++QM +
Sbjct: 120 LACFGHVRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRF 179

Query: 392 RNPLLYEQLVGQYLTDEEIKER 457
           R PLLYEQ +GQYLT EE+  R
Sbjct: 180 RAPLLYEQYIGQYLTQEELSAR 201


>BC007575-1|AAH07575.1|  173|Homo sapiens CCDC97 protein protein.
          Length = 173

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +2

Query: 365 YFSEKQMMYRNPLLYEQLVGQYLTDEEIKER 457
           YFS++QM +R PLLYEQ +GQYLT EE+  R
Sbjct: 1   YFSDEQMRFRAPLLYEQYIGQYLTQEELSAR 31


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,177,878
Number of Sequences: 237096
Number of extensions: 1075523
Number of successful extensions: 2604
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)