Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31714
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81109-8|CAB54296.1|  270|Caenorhabditis elegans Hypothetical pr...    43   1e-04
Z81109-7|CAB03248.1|  268|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z81109-9|CAB54295.1|  226|Caenorhabditis elegans Hypothetical pr...    38   0.004
AC024790-1|AAK84609.1|  315|Caenorhabditis elegans Hypothetical ...    32   0.21 
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    29   2.6  
U29537-8|ABS83848.1|  258|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AL110480-1|CAB60325.2|  437|Caenorhabditis elegans Hypothetical ...    28   3.4  
AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical ...    27   6.0  
AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z92784-5|CAB07196.3|  554|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z81109-8|CAB54296.1|  270|Caenorhabditis elegans Hypothetical
           protein R10D12.13b protein.
          Length = 270

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 26/105 (24%), Positives = 52/105 (49%)
 Frame = +2

Query: 155 KRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSXXXXXXXXXYK 334
           ++ PV FL ++ KYL P   + F   + + D   ++ +  +      T          + 
Sbjct: 10  EKLPV-FLSRYQKYLEPVDGQIF---ADNDDFVVQSIMKQIRGQQKMTEKEFQKRNYRFN 65

Query: 335 ALQKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRIT 469
           A+Q +  + ++FS+ +M  R P L++ ++G++L DEE  +  R T
Sbjct: 66  AMQNLLKEGEFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPT 110


>Z81109-7|CAB03248.1|  268|Caenorhabditis elegans Hypothetical
           protein R10D12.13a protein.
          Length = 268

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 26/105 (24%), Positives = 52/105 (49%)
 Frame = +2

Query: 155 KRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETSXXXXXXXXXYK 334
           ++ PV FL ++ KYL P   + F   + + D   ++ +  +      T          + 
Sbjct: 10  EKLPV-FLSRYQKYLEPVDGQIF---ADNDDFVVQSIMKQIRGQQKMTEKEKRNYR--FN 63

Query: 335 ALQKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRIT 469
           A+Q +  + ++FS+ +M  R P L++ ++G++L DEE  +  R T
Sbjct: 64  AMQNLLKEGEFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPT 108


>Z81109-9|CAB54295.1|  226|Caenorhabditis elegans Hypothetical
           protein R10D12.13c protein.
          Length = 226

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 15/47 (31%), Positives = 30/47 (63%)
 Frame = +2

Query: 329 YKALQKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRIT 469
           + A+Q +  + ++FS+ +M  R P L++ ++G++L DEE  +  R T
Sbjct: 20  FNAMQNLLKEGEFFSDAKMREREPYLFDAMIGKFLNDEERMDHLRPT 66


>AC024790-1|AAK84609.1|  315|Caenorhabditis elegans Hypothetical
           protein Y47D7A.3 protein.
          Length = 315

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 113 VRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSD 283
           V +C ++Q AL + + S +   +  GK     + K F+N  + K   F+N VH  SD
Sbjct: 234 VSSCSEVQSALRLAEISLIFPSITVGKLNGIKNSKSFQNFMTPKILNFQNLVHLTSD 290


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
            F15D4.7 protein.
          Length = 2268

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +2

Query: 152  YKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETS 301
            YK   V   M FGK   P   +  E +S       +NYVHYLS+  S  S
Sbjct: 2180 YKDPVVPEPMDFGKIQLPER-RTREYLSRKAKLAEKNYVHYLSNECSHRS 2228


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
            protein F15D4.7 protein.
          Length = 2268

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +2

Query: 152  YKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYLSDYHSETS 301
            YK   V   M FGK   P   +  E +S       +NYVHYLS+  S  S
Sbjct: 2180 YKDPVVPEPMDFGKIQLPER-RTREYLSRKAKLAEKNYVHYLSNECSHRS 2228


>U29537-8|ABS83848.1|  258|Caenorhabditis elegans Hypothetical
           protein F28B12.1b protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 143 LEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSKDQTFRNYVHYL 277
           + +Y+    +  + F +  AP+       ++S+ D+TFR  V+YL
Sbjct: 1   MALYRARSFQISITFHRMSAPSPSPSISRLNSNSDETFRIVVNYL 45


>AL110480-1|CAB60325.2|  437|Caenorhabditis elegans Hypothetical
           protein Y24F12A.1 protein.
          Length = 437

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 5   KNKLNESEVNPVTDIIDYLVRSANISFKNSHAN 103
           KN+ NE +V    DIIDY ++  N+ + +SH +
Sbjct: 116 KNQNNEQDVTSSGDIIDYFLQ-LNVPYIDSHCH 147


>AC006742-6|AAF60498.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.2 protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -3

Query: 415 LFI*KRISVHHLF-FTKIISFYLHFL*CLISSVPYPLASACFRMIVTQIVHVIPKCLIFG 239
           LF    +S    F F K + F++H L  +I +V   +   C    V  ++HV     IF 
Sbjct: 390 LFTIATVSTLRFFEFMKSLGFFIHILKKMIKTVLMFVVIFCTFWFVLAVIHVSISRSIFS 449

Query: 238 ARDIFKVFYVIRS 200
           +   F   Y++ S
Sbjct: 450 SESSF--LYILAS 460


>AC006742-3|AAF60501.1|  778|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.6 protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -3

Query: 415 LFI*KRISVHHLF-FTKIISFYLHFL*CLISSVPYPLASACFRMIVTQIVHVIPKCLIFG 239
           LF    +S    F F K + F++H L  +I +V   +   C    V  ++HV     IF 
Sbjct: 390 LFTIATVSTLRFFEFMKSLGFFIHILKKMIKTVLMFVVIFCTFWFVLAVIHVSISRSIFS 449

Query: 238 ARDIFKVFYVIRS 200
           +   F   Y++ S
Sbjct: 450 SESSF--LYILAS 460


>Z92784-5|CAB07196.3|  554|Caenorhabditis elegans Hypothetical
           protein F31C3.6a protein.
          Length = 554

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +2

Query: 341 QKMKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKERDRITENVSFLNLILETVDH 514
           +++   ++YF   QM + +PL  + L       +  KER R    +  L +I+E V++
Sbjct: 334 KRLIFSSEYFDSAQMTHPSPLAIQFLYDLRRVVDVAKERIRQRRFIPALPVIIEDVEN 391


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,336,351
Number of Sequences: 27780
Number of extensions: 200782
Number of successful extensions: 546
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)