Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31714
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.3  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    22   4.3  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   4.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   7.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   10.0 

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 347 MKIKTDYFSEKQMMYRNPLLYEQLVGQYLTDEEIKER 457
           + I  D   +K+  + + L+     G  LTD+E+KE+
Sbjct: 305 LDIDDDVGEKKRQAFLDLLIEAGQNGVLLTDKEVKEQ 341


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 111 GCSLAWEFLKDIF 73
           GC +AW+F K I+
Sbjct: 124 GCEVAWQFGKCIY 136


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 111 GCSLAWEFLKDIF 73
           GC +AW+F K I+
Sbjct: 98  GCEVAWQFGKCIY 110


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 99  LMNNR*GHVRNCKWPLKFI 155
           L  NR  H+RNC   LK +
Sbjct: 56  LEKNRRAHLRNCLEKLKVL 74


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 35  PVTDIIDYLVRSANISF 85
           P T+ + YL+ S+ ISF
Sbjct: 199 PFTEHLGYLIFSSTISF 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,023
Number of Sequences: 438
Number of extensions: 2183
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)