Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31713
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   6.9  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          19   9.2  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    19   9.2  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    19   9.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    19   9.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    19   9.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    19   9.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   9.2  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           19   9.2  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 174 GPIPSCTGSTCRIIC 130
           G IP  + STC ++C
Sbjct: 72  GAIPVVSLSTCSMLC 86


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 155 RAQPAE*FANTSPKQEQCLAESYSH 81
           R+ PAE  ++ SP+     A S  H
Sbjct: 155 RSSPAETASSLSPQSVASTASSADH 179


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 285 GLACLYLPP 259
           G +CLY+PP
Sbjct: 113 GGSCLYVPP 121


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 285 GLACLYLPP 259
           G +CLY+PP
Sbjct: 113 GGSCLYVPP 121


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 285 GLACLYLPP 259
           G +CLY+PP
Sbjct: 113 GGSCLYVPP 121


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 80  SVSRILPSTAL 112
           S+S ILP TAL
Sbjct: 24  SISSILPETAL 34


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 4/6 (66%), Positives = 6/6 (100%)
 Frame = -1

Query: 219 TCWVVY 202
           TCW++Y
Sbjct: 57  TCWIIY 62


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 196 DSINNPTCXXRGREYXWLLQ 255
           +  NNP C   GR+    LQ
Sbjct: 545 EDCNNPECLFDGRDCEESLQ 564


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 155 RAQPAE*FANTSPKQEQCLAESYSH 81
           R+ PAE  ++ SP+     A S  H
Sbjct: 146 RSSPAETASSLSPQSVASTASSADH 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,393
Number of Sequences: 336
Number of extensions: 1051
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)