Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31713
         (312 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150329-1|AAI50330.1|  636|Homo sapiens GOLGA8A protein protein.      27   8.8  
BC093673-1|AAH93673.1|  603|Homo sapiens golgi autoantigen, golg...    27   8.8  
AF204231-1|AAF28463.1|  631|Homo sapiens 88-kDa Golgi protein pr...    27   8.8  
AF163441-1|AAF34136.1|  460|Homo sapiens golgin 67 protein.            27   8.8  
AB020662-1|BAA74878.1|  632|Homo sapiens KIAA0855 protein protein.     27   8.8  

>BC150329-1|AAI50330.1|  636|Homo sapiens GOLGA8A protein protein.
          Length = 636

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 146 VEPVQLGIGPDAYQRNRTQ*TTQHVLXEXGNIXGSCRQGGKYKQASPG 289
           VE ++LG     Y+R R       +L E G+       GG + QA PG
Sbjct: 467 VEKLELGF--IQYRRERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPG 512


>BC093673-1|AAH93673.1|  603|Homo sapiens golgi autoantigen, golgin
           subfamily a, 8A protein.
          Length = 603

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 146 VEPVQLGIGPDAYQRNRTQ*TTQHVLXEXGNIXGSCRQGGKYKQASPG 289
           VE ++LG     Y+R R       +L E G+       GG + QA PG
Sbjct: 434 VEKLELGF--IQYRRERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPG 479


>AF204231-1|AAF28463.1|  631|Homo sapiens 88-kDa Golgi protein
           protein.
          Length = 631

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 146 VEPVQLGIGPDAYQRNRTQ*TTQHVLXEXGNIXGSCRQGGKYKQASPG 289
           VE ++LG     Y+R R       +L E G+       GG + QA PG
Sbjct: 462 VEKLELGF--IQYRRERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPG 507


>AF163441-1|AAF34136.1|  460|Homo sapiens golgin 67 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 146 VEPVQLGIGPDAYQRNRTQ*TTQHVLXEXGNIXGSCRQGGKYKQASPG 289
           VE ++LG     Y+R R       +L E G+       GG + QA PG
Sbjct: 291 VEKLELGF--IQYRRERCHQNVHRLLTEPGDSAKDAAPGGGHHQAGPG 336


>AB020662-1|BAA74878.1|  632|Homo sapiens KIAA0855 protein protein.
          Length = 632

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 146 VEPVQLGIGPDAYQRNRTQ*TTQHVLXEXGNIXGSCRQGGKYKQASPG 289
           VE ++LG     Y+R R       +L E G+       GG + QA PG
Sbjct: 463 VEKLELGF--IQYRRERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPG 508


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,803,563
Number of Sequences: 237096
Number of extensions: 766843
Number of successful extensions: 1201
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)