Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31712
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 49 2e-06
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 49 2e-06
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 49 2e-06
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 49 2e-06
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 49 2e-06
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 49 2e-06
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 47 1e-05
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 46 2e-05
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 40 0.002
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 34 0.060
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88) 30 1.3
SB_50447| Best HMM Match : ProQ (HMM E-Value=0.44) 29 2.3
SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 6.9
SB_18320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 6 DVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 62 DVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 630 DVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 41 DVVKRRPVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 3 DVVKRRPVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 43 DVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 1881 DVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 41 DVVKRRPVNCNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 3 DVVKRRPVNCNTTHYRANW 21
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 35 DVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 84 DVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 62 DVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 73 DVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 49 DVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANW 458
DVVKRRPVNCNTTHYRANW
Sbjct: 73 DVVKRRPVNCNTTHYRANW 91
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +2
Query: 422 SLATPSRGGARYPIRPIVSRITIHWPSFYN 511
S A + GGA PIRPIVSRITIHWP+FYN
Sbjct: 29 SRAAATDGGA--PIRPIVSRITIHWPAFYN 56
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 422 SLATPSRGGARYPIRPIVSRITIHWPSFYN 511
S A + GGA PIRPIVS ITIHWPSFYN
Sbjct: 31 SRAAATVGGA--PIRPIVSHITIHWPSFYN 58
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRAN 461
DVVKRRPVNCNTTHYRAN
Sbjct: 23 DVVKRRPVNCNTTHYRAN 40
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 461 IRPIVSRITIHWPSFY 508
IRPIVSRITIHWPSFY
Sbjct: 18 IRPIVSRITIHWPSFY 33
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRAN 461
D KRRPVNCNTTHYRAN
Sbjct: 80 DGEKRRPVNCNTTHYRAN 97
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 461 IRPIVSRITIHWPSFYNV 514
+RP+VSRITIHW SFYNV
Sbjct: 33 LRPVVSRITIHWTSFYNV 50
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 37.1 bits (82), Expect = 0.009
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 467 PIVSRITIHWPSFYNV 514
P +SRITIHWPSFYNV
Sbjct: 77 PYMSRITIHWPSFYNV 92
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 476 SRITIHWPSFYNV 514
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88)
Length = 634
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 481 TTHYRANWVPG---PPSRRCGKRGPNSSAAGKRR 389
T H + +W PG PP CG+ P+++++G R
Sbjct: 330 TAHAQKSWTPGCCFPPRLGCGRSYPDTNSSGTSR 363
>SB_50447| Best HMM Match : ProQ (HMM E-Value=0.44)
Length = 295
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 514 DVVKRRPVNCNTTHYRANWVPGPPSRRCGKRGPNSSAAGKRR 389
D ++ P T H A+ P P R K P A GK+R
Sbjct: 243 DEIEEEPPAKRTRHSAASTTPSPRKGRQKKSSPTKQAMGKKR 284
>SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 469 RANWVPGPPSRRCGK 425
R++W P PPS+ CG+
Sbjct: 139 RSDWTPAPPSKICGR 153
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 460 WVPGPPSRRCGKRGP 416
WVPGP RR RGP
Sbjct: 264 WVPGPEQRRDNMRGP 278
>SB_18320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 407 RTVRPSLATPSRGGARYPIRPIVSR 481
+T PSL TP+ G YPI+ + S+
Sbjct: 1 KTAFPSLTTPATKGTGYPIKTVQSQ 25
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,341,278
Number of Sequences: 59808
Number of extensions: 155270
Number of successful extensions: 902
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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