Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31710
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.41 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.41 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   2.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.7  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 166 LLACCSQVYGPCTMALXLVPAY 101
           LL+CCS ++G C  AL ++  +
Sbjct: 98  LLSCCSVIFG-CIFALKVIEVF 118


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 166 LLACCSQVYGPCTMALXLVPAY 101
           LL+CCS ++G C  AL ++  +
Sbjct: 98  LLSCCSVIFG-CIFALKVIEVF 118


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 45  TTKSPPPWYAYQXRNMQAM 101
           T  +PPP Y YQ    +A+
Sbjct: 143 TNPTPPPHYTYQIIPYEAL 161


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = -2

Query: 260 SGSGLTSTWASFLT---GVTRTYLVYLTQHGG 174
           S  G+     S LT   G   T+LV L Q+GG
Sbjct: 356 SSFGMLKISRSLLTSFGGALTTFLVILFQYGG 387


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 237 LGELPYWSYADLPRLPY 187
           LG +P W Y    R+P+
Sbjct: 323 LGRVPIWPYTLYFRMPH 339


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 237 LGELPYWSYADLPRLPY 187
           LG +P W Y    R+P+
Sbjct: 330 LGRVPIWPYTLYFRMPH 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,303
Number of Sequences: 336
Number of extensions: 1541
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)